Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 EIF4EP2-201ENST00000422816 654 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AC098831.1-201ENST00000440661 216 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AC144568.1-201ENST00000520139 137 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 DEFB108E-201ENST00000524692 240 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 MIR4273-201ENST00000582824 84 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 MIR5684-201ENST00000585074 65 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AL158827.2-201ENST00000602494 330 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AC084757.4-201ENST00000616350 526 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AL691447.3-201ENST00000635020 330 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 HSPA8P1-201ENST00000425843 1833 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 AC005183.1-201ENST00000603687 1979 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC083843.3-201ENST00000623679 2186 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 SNORA60-201ENST00000362396 134 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 snoU2_19.2-201ENST00000363024 80 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.245-201ENST00000364493 95 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.352-201ENST00000365439 102 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AL158156.1-201ENST00000422509 473 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC007919.1-201ENST00000429380 217 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 DAP3P1-201ENST00000441522 278 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 TMSB4XP3-201ENST00000445144 114 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC013470.1-201ENST00000453438 462 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 IGKV2-23-201ENST00000518729 323 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC084851.1-201ENST00000529105 249 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC004584.2-201ENST00000570407 410 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 AL591516.1-201ENST00000611326 274 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 FP236240.3-201ENST00000623061 327 ntBASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CSB-PGBD3P0DP91 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RNA5SP119-201ENST00000362715 117 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-1025P-201ENST00000410629 104 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.793-201ENST00000411222 111 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RPL36AP10-201ENST00000421785 322 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AL590383.1-201ENST00000428602 75 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 MTCO3P29-201ENST00000432119 779 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RPL23AP22-201ENST00000437556 453 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 FABP5P15-201ENST00000453566 214 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.644-201ENST00000459006 113 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AC108022.1-201ENST00000493466 478 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RN7SL323P-201ENST00000494712 295 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 NDUFB4P9-201ENST00000511646 388 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.674-201ENST00000516362 113 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RNA5SP290-201ENST00000517133 127 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 MIR548AI-201ENST00000579940 88 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RN7SL435P-201ENST00000584418 282 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 SRGNP1-201ENST00000603392 451 ntBASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.44□□□□□ -1.54
CSB-PGBD3P0DP91 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AP000560.1-201ENST00000624150 1937 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.324-201ENST00000365165 102 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-48P-201ENST00000384161 107 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 MIR1298-201ENST00000408783 112 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 AC091286.1-201ENST00000431233 461 ntBASIC5.43□□□□□ -1.54
CSB-PGBD3P0DP91 NDUFS5P3-201ENST00000450668 321 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms