Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC008267.5-201ENST00000424928 265 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AL035407.1-201ENST00000429211 571 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.69□□□□□ -2.14
TPM1P09493 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.69□□□□□ -2.14
TPM1P09493 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.69□□□□□ -2.14
TPM1P09493 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.69□□□□□ -2.14
TPM1P09493 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
TPM1P09493 RNU6-64P-201ENST00000517119 105 ntBASIC1.69□□□□□ -2.14
TPM1P09493 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.69□□□□□ -2.14
TPM1P09493 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.69□□□□□ -2.14
TPM1P09493 MIR4293-201ENST00000584305 78 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
TPM1P09493 MTATP6P2-201ENST00000603319 678 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AC016925.2-201ENST00000605108 242 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.69□□□□□ -2.14
TPM1P09493 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AL133445.2-201ENST00000611191 527 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AC099842.1-201ENST00000619919 596 ntBASIC1.69□□□□□ -2.14
TPM1P09493 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.69□□□□□ -2.14
TPM1P09493 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TPM1P09493 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.69□□□□□ -2.14
TPM1P09493 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.69□□□□□ -2.14
TPM1P09493 MTND5P33-201ENST00000571250 1450 ntBASIC1.69□□□□□ -2.14
TPM1P09493 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TPM1P09493 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.68□□□□□ -2.14
TPM1P09493 SNORD114-19-201ENST00000363072 75 ntBASIC1.68□□□□□ -2.14
TPM1P09493 RNU6-1284P-201ENST00000363701 100 ntBASIC1.68□□□□□ -2.14
TPM1P09493 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
TPM1P09493 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
TPM1P09493 MIR1284-201ENST00000408337 120 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.68□□□□□ -2.14
TPM1P09493 AC013262.1-201ENST00000426710 252 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AL592045.1-201ENST00000429867 352 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AP000542.1-201ENST00000448473 371 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AC245102.2-201ENST00000448956 180 ntBASIC1.68□□□□□ -2.14
TPM1P09493 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM1P09493 AC113347.3-201ENST00000509113 148 ntBASIC1.68□□□□□ -2.14
TPM1P09493 RNU6-143P-201ENST00000516942 93 ntBASIC1.68□□□□□ -2.14
TPM1P09493 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AP005597.4-201ENST00000526762 229 ntBASIC1.68□□□□□ -2.14
TPM1P09493 AP000763.2-201ENST00000540641 163 ntBASIC1.68□□□□□ -2.14
TPM1P09493 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.68□□□□□ -2.14
TPM1P09493 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM1P09493 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.68□□□□□ -2.14
TPM1P09493 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.68□□□□□ -2.14
TPM1P09493 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
TPM1P09493 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
TPM1P09493 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TPM1P09493 RNU6-288P-201ENST00000363690 104 ntBASIC1.67□□□□□ -2.14
TPM1P09493 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
TPM1P09493 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
TPM1P09493 MIR1262-201ENST00000408276 93 ntBASIC1.67□□□□□ -2.14
TPM1P09493 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TPM1P09493 AC074117.2-201ENST00000417130 397 ntBASIC1.67□□□□□ -2.14
TPM1P09493 AL445669.1-201ENST00000426743 755 ntBASIC1.67□□□□□ -2.14
TPM1P09493 AL357134.1-201ENST00000445848 426 ntBASIC1.67□□□□□ -2.14
TPM1P09493 EEF1E1P1-201ENST00000446998 430 ntBASIC1.67□□□□□ -2.14
TPM1P09493 USP9YP10-201ENST00000454868 628 ntBASIC1.67□□□□□ -2.14
TPM1P09493 FO393415.2-201ENST00000480085 343 ntBASIC1.67□□□□□ -2.14
TPM1P09493 FAM206BP-201ENST00000510179 541 ntBASIC1.67□□□□□ -2.14
TPM1P09493 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.67□□□□□ -2.14
TPM1P09493 AP006587.4-201ENST00000526053 529 ntBASIC1.67□□□□□ -2.14
TPM1P09493 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TPM1P09493 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.67□□□□□ -2.14
TPM1P09493 AC093249.1-201ENST00000567049 203 ntBASIC1.67□□□□□ -2.14
TPM1P09493 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.67□□□□□ -2.14
TPM1P09493 AC008507.2-201ENST00000588402 1176 ntBASIC1.67□□□□□ -2.14
TPM1P09493 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.67□□□□□ -2.14
TPM1P09493 AC098614.4-201ENST00000607601 462 ntBASIC1.67□□□□□ -2.14
TPM1P09493 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.67□□□□□ -2.14
TPM1P09493 MIR7974-201ENST00000615835 79 ntBASIC1.67□□□□□ -2.14
TPM1P09493 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TPM1P09493 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TPM1P09493 RNU6-14P-201ENST00000384630 106 ntBASIC1.66□□□□□ -2.14
TPM1P09493 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.66□□□□□ -2.14
TPM1P09493 MTCO1P17-201ENST00000411522 491 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM1P09493 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM1P09493 RPL23AP76-201ENST00000441860 458 ntBASIC1.66□□□□□ -2.14
TPM1P09493 HMGN2P23-201ENST00000456759 269 ntBASIC1.66□□□□□ -2.14
TPM1P09493 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
TPM1P09493 RPL39P36-201ENST00000490784 156 ntBASIC1.66□□□□□ -2.14
TPM1P09493 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.66□□□□□ -2.14
TPM1P09493 AC098799.1-201ENST00000504752 800 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AC109927.2-201ENST00000506416 303 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AC008837.2-201ENST00000513076 418 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.66□□□□□ -2.14
TPM1P09493 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM1P09493 AC074050.1-201ENST00000563247 211 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TPM1P09493 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM1P09493 AC073410.2-201ENST00000603240 332 ntBASIC1.66□□□□□ -2.14
TPM1P09493 BNIP3P9-201ENST00000603714 553 ntBASIC1.66□□□□□ -2.14
TPM1P09493 AL158163.2-201ENST00000619110 700 ntBASIC1.66□□□□□ -2.14
TPM1P09493 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.66□□□□□ -2.14
TPM1P09493 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
TPM1P09493 MTND5P10-201ENST00000603719 1809 ntBASIC1.66□□□□□ -2.14
TPM1P09493 RNU6-338P-201ENST00000383888 105 ntBASIC1.65□□□□□ -2.15
TPM1P09493 RNU6-611P-201ENST00000384276 104 ntBASIC1.65□□□□□ -2.15
TPM1P09493 SNORD14D-201ENST00000384390 87 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms