Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.95□□□□□ -2.26
CXCL1P09341 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.95□□□□□ -2.26
CXCL1P09341 RRN3P3-201ENST00000549207 578 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.95□□□□□ -2.26
CXCL1P09341 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.95□□□□□ -2.26
CXCL1P09341 AC136619.2-201ENST00000563361 631 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 AL132822.1-201ENST00000617063 513 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 MIR6852-201ENST00000621699 66 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 AC097655.1-201ENST00000635075 318 ntBASIC0.95□□□□□ -2.26
CXCL1P09341 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CXCL1P09341 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 RNU6-188P-201ENST00000364207 107 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 RNA5SP190-201ENST00000365222 118 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CXCL1P09341 SNORD65.1-201ENST00000390889 71 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CXCL1P09341 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.94□□□□□ -2.26
CXCL1P09341 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.94□□□□□ -2.26
CXCL1P09341 MTCO1P44-201ENST00000441935 243 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC079448.1-201ENST00000449377 373 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.94□□□□□ -2.26
CXCL1P09341 RNU1-123P-201ENST00000458950 160 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC008379.1-201ENST00000463655 464 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC005908.1-201ENST00000468701 347 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 PTP4A1P4-201ENST00000512479 322 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 RNA5SP445-201ENST00000515889 115 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AP003034.1-201ENST00000534621 422 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC015720.1-201ENST00000565251 277 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.94□□□□□ -2.26
CXCL1P09341 AC103987.3-201ENST00000582071 292 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 RPL30P11-203ENST00000598995 310 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.94□□□□□ -2.26
CXCL1P09341 AC107952.2-201ENST00000606048 486 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AL022345.1-201ENST00000607292 135 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 AC096772.1-201ENST00000609146 564 ntBASIC0.94□□□□□ -2.26
CXCL1P09341 CDR1-202ENST00000625883 1485 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.93□□□□□ -2.26
CXCL1P09341 HAUS6P2-201ENST00000433254 2404 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CXCL1P09341 RNU6-1032P-201ENST00000384100 107 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 RNU6-952P-201ENST00000391164 108 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 RNU6-174P-201ENST00000410406 106 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.93□□□□□ -2.26
CXCL1P09341 MTATP6P30-201ENST00000443540 664 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 RNU7-136P-201ENST00000458819 69 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 RPL37P6-201ENST00000460682 294 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CXCL1P09341 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC139453.3-201ENST00000493276 369 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC025465.3-201ENST00000510570 311 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 MTCYBP43-201ENST00000513621 740 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.93□□□□□ -2.26
CXCL1P09341 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CXCL1P09341 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC005668.1-201ENST00000571142 476 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 MIR3660-201ENST00000584845 100 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 CLIC4P2-201ENST00000601934 717 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 WISP1-OT1-201ENST00000602893 642 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AP001485.1-201ENST00000604799 199 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AC098614.4-201ENST00000607601 462 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AL133445.2-201ENST00000611191 527 ntBASIC0.93□□□□□ -2.26
CXCL1P09341 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.93□□□□□ -2.26
CXCL1P09341 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.92□□□□□ -2.26
CXCL1P09341 TEX21P-201ENST00000447107 1476 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CXCL1P09341 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 SNORD14B-201ENST00000364533 90 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AC008267.5-201ENST00000424928 265 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.92□□□□□ -2.26
CXCL1P09341 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.92□□□□□ -2.26
CXCL1P09341 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.92□□□□□ -2.26
CXCL1P09341 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.92□□□□□ -2.26
CXCL1P09341 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.92□□□□□ -2.26
CXCL1P09341 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.92□□□□□ -2.26
CXCL1P09341 snoU13.9-201ENST00000458927 103 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 TRBV12-1-201ENST00000479785 344 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AC023194.1-201ENST00000493084 308 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.92□□□□□ -2.26
CXCL1P09341 AC121161.1-201ENST00000510606 652 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.92□□□□□ -2.26
CXCL1P09341 AP005660.1-201ENST00000522972 293 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 SLC2A13P1-201ENST00000531560 322 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.92□□□□□ -2.26
CXCL1P09341 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.92□□□□□ -2.26
CXCL1P09341 BNIP3P27-201ENST00000599991 412 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AC097468.3-201ENST00000607956 456 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.92□□□□□ -2.26
CXCL1P09341 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 AP005901.5-201ENST00000545779 1796 ntBASIC0.92□□□□□ -2.26
CXCL1P09341 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms