Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SNORD56.2-201ENST00000363242 71 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU6-898P-201ENST00000365627 104 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU6-190P-201ENST00000384154 102 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AL445529.1-201ENST00000398713 389 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC006366.1-201ENST00000422002 759 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RPL30P4-201ENST00000429309 333 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AL591704.1-201ENST00000432574 275 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 MICF-203ENST00000432679 129 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 USP9YP12-201ENST00000450481 570 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 DYNLL1P5-201ENST00000467158 270 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 BZW1P2-201ENST00000473537 826 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RPL30P6-201ENST00000475925 342 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 MRPS33P3-201ENST00000513456 322 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU6-143P-201ENST00000516942 93 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 SNORA31.18-201ENST00000517043 134 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU6-1220P-201ENST00000517126 108 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU1-104P-201ENST00000517280 175 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC010186.2-204ENST00000537668 439 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AP002770.2-201ENST00000543613 532 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 ANP32BP3-201ENST00000559213 706 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC009063.1-201ENST00000563342 702 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC023824.2-201ENST00000566185 400 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 MIR3616-201ENST00000584070 92 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC112191.3-201ENST00000604371 277 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 APOOP1-201ENST00000604695 592 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 Z99289.3-201ENST00000605586 594 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 RNU6-87P-201ENST00000607561 108 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 MIR6134-201ENST00000617606 109 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC009878.1-201ENST00000621819 340 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.85□□□□□ -2.11
HLA-DPB1P04440 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 SNORA67.1-201ENST00000364749 141 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RNU6-19P-201ENST00000384718 107 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 MIR518D-201ENST00000385014 87 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 SNORA40C-201ENST00000391285 128 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 SNORA11.4-201ENST00000408823 129 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RNU6-1025P-201ENST00000410629 104 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RNU2-40P-201ENST00000410833 196 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC114491.1-201ENST00000416095 246 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 PTGES3P4-201ENST00000426243 356 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC007560.1-201ENST00000426912 237 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 UBE2D3P4-201ENST00000441973 436 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 TAF9P1-201ENST00000445421 515 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 TAF9P2-201ENST00000454958 515 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RAP1BP2-201ENST00000478270 544 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC011005.2-201ENST00000487324 359 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC026801.1-201ENST00000497178 464 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC010486.1-201ENST00000511793 424 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC008549.1-201ENST00000512900 643 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 SNORA25.11-201ENST00000515935 105 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 RNU7-51P-201ENST00000516560 62 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC011979.2-201ENST00000527568 352 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC022878.1-201ENST00000530684 149 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 LRRC34P1-201ENST00000542742 915 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AL157871.3-201ENST00000557231 293 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC025678.1-201ENST00000567861 338 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC109446.2-201ENST00000567872 497 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 MIR4782-201ENST00000577987 79 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC012065.4-201ENST00000602445 679 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AL359999.1-201ENST00000604513 294 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 FRG1KP-201ENST00000623592 341 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AF246928.1-201ENST00000623768 87 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 AC025048.6-202ENST00000627667 438 ntBASIC1.84□□□□□ -2.11
HLA-DPB1P04440 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HLA-DPB1P04440 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HLA-DPB1P04440 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms