Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A1P02462 MIR4658-201ENST00000584344 65 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC022306.3-201ENST00000619930 550 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AP002782.1-201ENST00000623107 614 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A1P02462 AC006927.4-201ENST00000639187 543 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL4A1P02462 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A1P02462 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 RNU6-223P-201ENST00000362830 107 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 RNU6-359P-201ENST00000365466 108 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 Y_RNA.465-201ENST00000384293 102 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL4A1P02462 RNU6-1242P-201ENST00000391052 103 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 RNA5SP354-201ENST00000391247 136 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MIR320C1-201ENST00000408566 88 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A1P02462 OR51A5P-201ENST00000415429 942 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 HMGB1P49-201ENST00000418882 569 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 PPP1R11P2-201ENST00000423543 382 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A1P02462 AC008850.1-201ENST00000427546 362 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A1P02462 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 AC114981.1-201ENST00000503897 678 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 AC022447.3-201ENST00000506865 495 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MRPS17P9-201ENST00000511924 393 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC109445.1-201ENST00000512356 383 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 OR6C7P-201ENST00000547875 934 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A1P02462 HSBP1P1-201ENST00000555205 166 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC009712.1-201ENST00000564938 316 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC023824.2-201ENST00000566185 400 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MTCO2P2-201ENST00000591258 225 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MTND4LP5-201ENST00000605152 292 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AL133445.2-201ENST00000611191 527 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC107075.1-201ENST00000613695 314 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC098657.3-201ENST00000620434 263 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AL445264.1-201ENST00000621719 171 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC009268.2-201ENST00000621925 457 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AL159972.1-201ENST00000625150 448 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MIR4275-201ENST00000636486 87 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MTND1P37-201ENST00000636562 264 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL4A1P02462 RNU5A-1-201ENST00000362698 116 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 Y_RNA.192-201ENST00000363977 102 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RNU6-432P-201ENST00000384196 109 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RNY1P4-201ENST00000384595 115 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 SNORA46.1-201ENST00000391069 153 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RPS20P15-201ENST00000412792 311 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 CCDC58P2-201ENST00000417131 366 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RPL31P63-201ENST00000422565 375 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AC019178.2-201ENST00000423595 505 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A1P02462 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A1P02462 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A1P02462 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A1P02462 TRGVB-201ENST00000453257 471 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A1P02462 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A1P02462 HSPE1P23-201ENST00000509838 286 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AC024589.1-201ENST00000512207 263 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RNU6-714P-201ENST00000516963 103 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 SNORA31.18-201ENST00000517043 134 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 SCARNA1-201ENST00000517138 166 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A1P02462 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A1P02462 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A1P02462 AC011260.1-201ENST00000578420 472 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 RN7SL793P-201ENST00000583259 296 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A1P02462 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.28□□□□□ -2.2
COL4A1P02462 AC131235.4-201ENST00000609288 620 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AL391834.2-201ENST00000609982 546 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 AC090132.2-201ENST00000615881 347 ntBASIC1.28□□□□□ -2.2
COL4A1P02462 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.28□□□□□ -2.2
COL4A1P02462 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.28□□□□□ -2.21
COL4A1P02462 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL4A1P02462 TPTE2P4-201ENST00000258589 1605 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 RNU6-37P-201ENST00000362692 107 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 RNU5E-8P-201ENST00000363502 116 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 RNU6-11P-201ENST00000364234 107 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 RNU6-217P-201ENST00000384164 104 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 RNA5SP465-201ENST00000391195 109 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.27□□□□□ -2.21
COL4A1P02462 AL022400.1-201ENST00000423946 935 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A1P02462 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A1P02462 EEF1A1P39-201ENST00000440791 250 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.27□□□□□ -2.21
COL4A1P02462 SNRPFP3-201ENST00000457792 225 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC005410.1-202ENST00000460347 485 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 AC105252.1-201ENST00000503089 286 ntBASIC1.27□□□□□ -2.21
COL4A1P02462 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A1P02462 RNA5SP384-201ENST00000516615 116 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms