Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC026436.1-201ENST00000510537 270 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
COL2A1P02458 AC008716.1-201ENST00000511084 513 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 RN7SKP256-201ENST00000517201 314 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC008562.1-201ENST00000521763 330 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 SUB1P1-201ENST00000524415 382 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AP003497.1-201ENST00000528472 562 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL2A1P02458 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL2A1P02458 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.81□□□□□ -1.96
COL2A1P02458 DNAJC8P1-201ENST00000554535 372 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.81□□□□□ -1.96
COL2A1P02458 AC093249.1-201ENST00000567049 203 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 MIR4498-201ENST00000577599 66 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC2.81□□□□□ -1.96
COL2A1P02458 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.81□□□□□ -1.96
COL2A1P02458 AC004696.1-201ENST00000614345 607 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC084781.2-201ENST00000615568 161 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 AC009161.2-201ENST00000624626 138 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL2A1P02458 WWP1P1-201ENST00000466609 2769 ntBASIC2.81□□□□□ -1.96
COL2A1P02458 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.81□□□□□ -1.96
COL2A1P02458 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
COL2A1P02458 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 RNU4-20P-201ENST00000365601 151 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RNU1-39P-201ENST00000383897 165 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RNU6-730P-201ENST00000383954 104 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 Y_RNA.459-201ENST00000384251 102 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RNU6-738P-201ENST00000384531 106 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL2A1P02458 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 BTBD10P2-201ENST00000404779 676 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 ELOCP4-201ENST00000420090 333 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.8□□□□□ -1.96
COL2A1P02458 HMGB1P15-201ENST00000453854 435 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 CEACAMP4-201ENST00000457676 421 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RPL21P71-201ENST00000465598 459 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RPL23AP70-201ENST00000483361 460 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AP001086.1-201ENST00000494882 321 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.8□□□□□ -1.96
COL2A1P02458 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.8□□□□□ -1.96
COL2A1P02458 RNU6-1038P-201ENST00000516516 104 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RNU6-1046P-201ENST00000516538 107 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 RNU6-347P-201ENST00000516658 105 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC022616.3-201ENST00000523940 148 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 PTP4A1P6-201ENST00000531034 478 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC121334.2-201ENST00000605387 271 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.8□□□□□ -1.96
COL2A1P02458 AL627309.6-201ENST00000606857 840 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AL355472.4-201ENST00000610233 626 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC105429.2-201ENST00000610567 517 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC104237.2-201ENST00000612456 443 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC008121.3-201ENST00000618726 433 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.8□□□□□ -1.96
COL2A1P02458 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
COL2A1P02458 DBF4P1-201ENST00000412976 1892 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.8□□□□□ -1.96
COL2A1P02458 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 AL118496.1-201ENST00000440201 1812 ntBASIC2.8□□□□□ -1.96
COL2A1P02458 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL2A1P02458 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL2A1P02458 RNU4-1-201ENST00000363925 141 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 SNORA51.2-201ENST00000364595 132 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 Y_RNA.384-201ENST00000383909 102 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 Y_RNA.474-201ENST00000384341 102 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 Y_RNA.508-201ENST00000384502 114 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 SNORD37.1-201ENST00000390968 65 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 RN7SKP32-201ENST00000410167 303 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 Y_RNA.605-201ENST00000410577 105 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC092832.1-201ENST00000422934 400 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.79□□□□□ -1.96
COL2A1P02458 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.79□□□□□ -1.96
COL2A1P02458 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL2A1P02458 RPL7P52-201ENST00000449200 742 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 RPL36AP21-201ENST00000490372 323 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC093012.1-202ENST00000549403 582 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.79□□□□□ -1.96
COL2A1P02458 FRG2DP-202ENST00000566967 323 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 MIR4742-201ENST00000581069 85 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC098848.2-201ENST00000588023 330 ntBASIC2.79□□□□□ -1.96
COL2A1P02458 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.79□□□□□ -1.96
COL2A1P02458 AC093838.1-201ENST00000613014 469 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms