Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL450270.1-201ENST00000606160 391 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 uc_338.14-201ENST00000613162 166 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 MIR5739-201ENST00000619803 80 ntBASIC1.15□□□□□ -2.23
COL1A1P02452 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL1A1P02452 AL356473.1-201ENST00000406203 1408 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 Y_RNA.85-201ENST00000363014 111 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 SNORD65C-201ENST00000390962 71 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 RNU11-5P-201ENST00000391216 129 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 OR9R1P-201ENST00000412200 877 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 MTND6P13-201ENST00000443510 523 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.14□□□□□ -2.23
COL1A1P02452 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.14□□□□□ -2.23
COL1A1P02452 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.14□□□□□ -2.23
COL1A1P02452 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.14□□□□□ -2.23
COL1A1P02452 AC093752.1-206ENST00000511823 336 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.14□□□□□ -2.23
COL1A1P02452 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.14□□□□□ -2.23
COL1A1P02452 BNIP3P25-201ENST00000596023 559 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.14□□□□□ -2.23
COL1A1P02452 AC006213.5-201ENST00000619673 288 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 AC024581.2-201ENST00000619986 252 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 DBF4P1-201ENST00000412976 1892 ntBASIC1.14□□□□□ -2.23
COL1A1P02452 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.14□□□□□ -2.23
COL1A1P02452 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL1A1P02452 MTCO2P31-201ENST00000402702 684 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AL356131.1-201ENST00000405826 414 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 CCDC58P2-201ENST00000417131 366 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.13□□□□□ -2.23
COL1A1P02452 VN1R42P-201ENST00000424651 344 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AC092648.1-201ENST00000425870 423 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.13□□□□□ -2.23
COL1A1P02452 AC092393.1-201ENST00000439625 742 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.13□□□□□ -2.23
COL1A1P02452 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.13□□□□□ -2.23
COL1A1P02452 RNA5SP135-201ENST00000517019 125 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 MIR4713-201ENST00000582691 75 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AC133794.1-201ENST00000602731 914 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 DUXAP11-201ENST00000603858 526 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AC004067.1-201ENST00000608733 700 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AL138478.1-201ENST00000612252 832 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 AC003001.2-201ENST00000616294 831 ntBASIC1.13□□□□□ -2.23
COL1A1P02452 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
COL1A1P02452 RNU6-486P-201ENST00000363116 107 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
COL1A1P02452 SNORA8-201ENST00000384574 139 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RN7SKP200-201ENST00000410564 320 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.12□□□□□ -2.23
COL1A1P02452 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.12□□□□□ -2.23
COL1A1P02452 CBX3P6-201ENST00000430257 527 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC098831.1-201ENST00000440661 216 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 MTND3P4-201ENST00000453537 303 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RNU1-98P-201ENST00000458992 160 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COL1A1P02452 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC013828.1-201ENST00000481845 158 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.12□□□□□ -2.23
COL1A1P02452 HMGB1P35-201ENST00000503360 598 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC008269.2-201ENST00000561915 1105 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC079148.1-201ENST00000565944 819 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 MIR4698-201ENST00000577795 80 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.12□□□□□ -2.23
COL1A1P02452 MIR4714-201ENST00000580728 77 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.12□□□□□ -2.23
COL1A1P02452 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.12□□□□□ -2.23
COL1A1P02452 AL078605.1-201ENST00000603529 500 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 AC091304.6-201ENST00000619761 202 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AL590396.4-201ENST00000636779 956 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 MIR924-201ENST00000638017 53 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.12□□□□□ -2.23
COL1A1P02452 AL359854.1-201ENST00000614203 1594 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RNU6-716P-201ENST00000365621 103 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL1A1P02452 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.12□□□□□ -2.23
COL1A1P02452 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 FTH1P12-201ENST00000432137 551 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC234064.1-201ENST00000436312 247 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RNFT1P2-201ENST00000443064 757 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AL353691.1-201ENST00000451332 387 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 SUMO2P2-201ENST00000456482 255 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 GTF2IP12-201ENST00000456547 356 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RPS20P20-201ENST00000460498 340 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 RPL21P47-201ENST00000483696 477 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
COL1A1P02452 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.12□□□□□ -2.23
COL1A1P02452 RNA5SP112-201ENST00000515937 99 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.12□□□□□ -2.23
COL1A1P02452 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 AC080188.3-201ENST00000624842 748 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 MTND1P37-201ENST00000636562 264 ntBASIC1.12□□□□□ -2.23
COL1A1P02452 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
COL1A1P02452 ZNF849P-201ENST00000594711 1566 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC110491.1-201ENST00000562191 2010 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms