Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CLDN1O95832 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN1O95832 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CLDN1O95832 AC004520.1-201ENST00000608362 1413 ntBASIC2.68□□□□□ -1.98
CLDN1O95832 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN1O95832 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN1O95832 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN1O95832 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CLDN1O95832 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN1O95832 RNU6-550P-201ENST00000391057 101 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RNA5SP118-201ENST00000410385 109 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RNU4-46P-201ENST00000410818 138 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 MTCYBP8-201ENST00000422855 651 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AL590383.1-201ENST00000428602 75 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC009237.8-201ENST00000445492 379 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 NFU1P2-201ENST00000448700 469 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RNU7-180P-201ENST00000459240 63 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RPL31P58-201ENST00000469001 379 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RPL23AP11-201ENST00000475260 469 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN1O95832 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN1O95832 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN1O95832 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN1O95832 RNU1-143P-201ENST00000516296 146 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RNA5SP471-201ENST00000516971 106 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 SCARNA20.6-201ENST00000517251 106 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN1O95832 SUB1P1-201ENST00000524415 382 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC118273.2-201ENST00000532092 465 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 HIF1AP1-201ENST00000553642 175 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN1O95832 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN1O95832 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN1O95832 AC060780.3-201ENST00000589464 80 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC002545.1-201ENST00000592511 181 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC098826.3-201ENST00000603823 466 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AL161798.1-201ENST00000604630 131 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 U1.23-201ENST00000610293 146 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AL020991.1-201ENST00000612314 373 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 DISC2.1-201ENST00000612827 205 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC130324.3-201ENST00000614165 542 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 RNU1-68P-201ENST00000615382 146 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AL590808.1-201ENST00000618696 141 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 U1.39-201ENST00000621562 146 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 DUXAP9-208ENST00000622815 614 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AP003122.6-201ENST00000623831 495 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC243829.7-201ENST00000633081 225 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.67□□□□□ -1.98
CLDN1O95832 AC007785.2-201ENST00000598627 1916 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 TPTE2P4-201ENST00000258589 1605 ntBASIC2.67□□□□□ -1.98
CLDN1O95832 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN1O95832 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN1O95832 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.66□□□□□ -1.98
CLDN1O95832 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN1O95832 AC022336.2-201ENST00000568966 2538 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 Y_RNA.88-201ENST00000363029 99 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU6-1167P-201ENST00000363227 94 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 U3.12-201ENST00000364498 214 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU6-877P-201ENST00000383868 107 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 MIR196B-201ENST00000384852 84 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU6-1077P-201ENST00000410506 102 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU2-52P-201ENST00000410680 190 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RPS12P24-201ENST00000412619 387 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 EEF1A1P40-201ENST00000412883 573 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 OR6C66P-201ENST00000414917 930 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 SRIP2-201ENST00000428470 166 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 HMGB1P27-201ENST00000431429 603 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AL591704.1-201ENST00000432574 275 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AL591212.2-201ENST00000433923 257 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 Z82210.1-201ENST00000440037 231 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 DPPA3P1-201ENST00000448050 469 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.66□□□□□ -1.98
CLDN1O95832 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 FABP5P15-201ENST00000453566 214 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RN7SL283P-201ENST00000489055 303 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 PRDX4P1-201ENST00000507189 574 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RBBP4P6-201ENST00000508098 202 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 SCGB1D5P-201ENST00000515134 247 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU4-29P-201ENST00000515943 174 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU6-123P-201ENST00000516163 102 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RNU6-358P-201ENST00000516564 75 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AC022690.1-201ENST00000526681 550 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 RANP3-201ENST00000530970 276 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN1O95832 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN1O95832 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.66□□□□□ -1.98
CLDN1O95832 AC008945.2-201ENST00000606056 604 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 AC022893.3-201ENST00000607665 437 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.66□□□□□ -1.98
CLDN1O95832 U6.114-201ENST00000636407 96 ntBASIC2.66□□□□□ -1.98
CLDN1O95832 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLDN1O95832 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms