Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX58O95786 AL157871.3-201ENST00000557231 293 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.19□□□□□ -1.9
DDX58O95786 AC021739.1-201ENST00000559631 174 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC027176.1-201ENST00000560204 514 ntBASIC3.19□□□□□ -1.9
DDX58O95786 MIR1273C-201ENST00000578669 77 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX58O95786 AC078899.3-201ENST00000599065 212 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AL670379.4-201ENST00000605279 254 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC012409.4-201ENST00000612923 249 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC099842.1-201ENST00000619919 596 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC024940.5-201ENST00000622889 474 ntBASIC3.19□□□□□ -1.9
DDX58O95786 AC025034.2-201ENST00000623264 286 ntBASIC3.19□□□□□ -1.9
DDX58O95786 U6.114-201ENST00000636407 96 ntBASIC3.19□□□□□ -1.9
DDX58O95786 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DDX58O95786 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
DDX58O95786 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX58O95786 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX58O95786 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX58O95786 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX58O95786 Y_RNA.33-201ENST00000362591 102 ntBASIC3.18□□□□□ -1.9
DDX58O95786 RNU6-1097P-201ENST00000363586 107 ntBASIC3.18□□□□□ -1.9
DDX58O95786 Y_RNA.296-201ENST00000364930 108 ntBASIC3.18□□□□□ -1.9
DDX58O95786 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
DDX58O95786 OR5H15-201ENST00000383696 930 ntBASIC3.18□□□□□ -1.9
DDX58O95786 Y_RNA.559-201ENST00000384686 107 ntBASIC3.18□□□□□ -1.9
DDX58O95786 SNORA67.4-201ENST00000384688 142 ntBASIC3.18□□□□□ -1.9
DDX58O95786 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX58O95786 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX58O95786 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX58O95786 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX58O95786 OSTCP8-201ENST00000445117 448 ntBASIC3.18□□□□□ -1.9
DDX58O95786 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
DDX58O95786 HMGN2P10-201ENST00000448085 265 ntBASIC3.18□□□□□ -1.9
DDX58O95786 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX58O95786 TPT1P7-201ENST00000458300 517 ntBASIC3.18□□□□□ -1.9
DDX58O95786 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX58O95786 RNU6-1183P-201ENST00000517054 60 ntBASIC3.18□□□□□ -1.9
DDX58O95786 OR4R1P-201ENST00000529879 463 ntBASIC3.18□□□□□ -1.9
DDX58O95786 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.18□□□□□ -1.9
DDX58O95786 GLYCAM1-201ENST00000546596 285 ntBASIC3.18□□□□□ -1.9
DDX58O95786 AL121821.2-201ENST00000556081 394 ntBASIC3.18□□□□□ -1.9
DDX58O95786 SUB1P2-201ENST00000556401 297 ntBASIC3.18□□□□□ -1.9
DDX58O95786 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX58O95786 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
DDX58O95786 AC087683.1-201ENST00000591187 441 ntBASIC3.18□□□□□ -1.9
DDX58O95786 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
DDX58O95786 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX58O95786 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX58O95786 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
DDX58O95786 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX58O95786 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX58O95786 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
DDX58O95786 Y_RNA.194-201ENST00000363985 102 ntBASIC3.17□□□□□ -1.9
DDX58O95786 RNU6-395P-201ENST00000365662 106 ntBASIC3.17□□□□□ -1.9
DDX58O95786 XGY1-201ENST00000381172 446 ntBASIC3.17□□□□□ -1.9
DDX58O95786 MIR1-2-201ENST00000384961 85 ntBASIC3.17□□□□□ -1.9
DDX58O95786 CISD1P1-201ENST00000393907 327 ntBASIC3.17□□□□□ -1.9
DDX58O95786 AC009963.1-201ENST00000417265 157 ntBASIC3.17□□□□□ -1.9
DDX58O95786 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX58O95786 AC104389.3-201ENST00000445629 235 ntBASIC3.17□□□□□ -1.9
DDX58O95786 RPL23AP45-201ENST00000476406 468 ntBASIC3.17□□□□□ -1.9
DDX58O95786 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX58O95786 SNORA31.19-201ENST00000517079 126 ntBASIC3.17□□□□□ -1.9
DDX58O95786 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
DDX58O95786 RANP3-201ENST00000530970 276 ntBASIC3.17□□□□□ -1.9
DDX58O95786 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.17□□□□□ -1.9
DDX58O95786 OR5AL2P-201ENST00000532185 920 ntBASIC3.17□□□□□ -1.9
DDX58O95786 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
DDX58O95786 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX58O95786 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX58O95786 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX58O95786 AC004223.2-201ENST00000590309 544 ntBASIC3.17□□□□□ -1.9
DDX58O95786 AC091805.2-201ENST00000603848 235 ntBASIC3.17□□□□□ -1.9
DDX58O95786 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX58O95786 MIR7515-201ENST00000637837 67 ntBASIC3.17□□□□□ -1.9
DDX58O95786 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX58O95786 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX58O95786 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX58O95786 RNA5SP456-201ENST00000364002 114 ntBASIC3.16□□□□□ -1.9
DDX58O95786 Y_RNA.367-201ENST00000365544 101 ntBASIC3.16□□□□□ -1.9
DDX58O95786 RNU6-108P-201ENST00000365558 107 ntBASIC3.16□□□□□ -1.9
DDX58O95786 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
DDX58O95786 AL359511.1-201ENST00000402970 211 ntBASIC3.16□□□□□ -1.9
DDX58O95786 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.16□□□□□ -1.9
DDX58O95786 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX58O95786 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.16□□□□□ -1.9
DDX58O95786 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.16□□□□□ -1.9
DDX58O95786 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
DDX58O95786 BTF3P15-201ENST00000455606 336 ntBASIC3.16□□□□□ -1.9
DDX58O95786 RPL23AP70-201ENST00000483361 460 ntBASIC3.16□□□□□ -1.9
DDX58O95786 GZMAP1-201ENST00000503054 631 ntBASIC3.16□□□□□ -1.9
DDX58O95786 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.16□□□□□ -1.9
DDX58O95786 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.16□□□□□ -1.9
DDX58O95786 RBBP4P6-201ENST00000508098 202 ntBASIC3.16□□□□□ -1.9
DDX58O95786 MTCO3P7-201ENST00000510008 774 ntBASIC3.16□□□□□ -1.9
DDX58O95786 AC098591.2-201ENST00000510152 315 ntBASIC3.16□□□□□ -1.9
DDX58O95786 RNU6-405P-201ENST00000516637 110 ntBASIC3.16□□□□□ -1.9
DDX58O95786 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms