Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU6-248P-201ENST00000410720 107 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC092809.3-201ENST00000415453 231 ntBASIC2.57□□□□□ -2
CSDE1O75534 BX295541.1-201ENST00000417774 250 ntBASIC2.57□□□□□ -2
CSDE1O75534 HMGB1P9-201ENST00000429856 646 ntBASIC2.57□□□□□ -2
CSDE1O75534 AL139415.2-201ENST00000431968 163 ntBASIC2.57□□□□□ -2
CSDE1O75534 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.57□□□□□ -2
CSDE1O75534 KATNBL1P3-201ENST00000443475 909 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC010095.1-201ENST00000443543 144 ntBASIC2.57□□□□□ -2
CSDE1O75534 AL360221.1-201ENST00000445989 335 ntBASIC2.57□□□□□ -2
CSDE1O75534 Z83846.1-201ENST00000446798 265 ntBASIC2.57□□□□□ -2
CSDE1O75534 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.57□□□□□ -2
CSDE1O75534 AL513124.1-201ENST00000450410 614 ntBASIC2.57□□□□□ -2
CSDE1O75534 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.57□□□□□ -2
CSDE1O75534 FABP5P15-201ENST00000453566 214 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.57□□□□□ -2
CSDE1O75534 RPL39P36-201ENST00000490784 156 ntBASIC2.57□□□□□ -2
CSDE1O75534 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.57□□□□□ -2
CSDE1O75534 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.57□□□□□ -2
CSDE1O75534 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.57□□□□□ -2
CSDE1O75534 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.57□□□□□ -2
CSDE1O75534 AC087883.1-201ENST00000551882 391 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC007336.1-201ENST00000576365 3828 ntBASIC2.57□□□□□ -2
CSDE1O75534 MIR3167-201ENST00000579623 85 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.57□□□□□ -2
CSDE1O75534 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.57□□□□□ -2
CSDE1O75534 PIGPP4-201ENST00000584447 307 ntBASIC2.57□□□□□ -2
CSDE1O75534 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.57□□□□□ -2
CSDE1O75534 AL158032.1-201ENST00000605401 106 ntBASIC2.57□□□□□ -2
CSDE1O75534 RN7SKP299-201ENST00000606679 301 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC022893.3-201ENST00000607665 437 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC006566.1-201ENST00000608943 513 ntBASIC2.57□□□□□ -2
CSDE1O75534 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC010678.1-201ENST00000614118 713 ntBASIC2.57□□□□□ -2
CSDE1O75534 AC090582.1-201ENST00000636321 199 ntBASIC2.57□□□□□ -2
CSDE1O75534 Z99571.1-201ENST00000636677 394 ntBASIC2.57□□□□□ -2
CSDE1O75534 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CSDE1O75534 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
CSDE1O75534 U8.8-201ENST00000365399 135 ntBASIC2.56□□□□□ -2
CSDE1O75534 Y_RNA.553-201ENST00000384670 102 ntBASIC2.56□□□□□ -2
CSDE1O75534 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
CSDE1O75534 MIR558-201ENST00000384920 94 ntBASIC2.56□□□□□ -2
CSDE1O75534 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
CSDE1O75534 BTF3P7-201ENST00000407097 488 ntBASIC2.56□□□□□ -2
CSDE1O75534 RNU2-39P-201ENST00000410604 198 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC023141.4-201ENST00000412031 328 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC096649.2-201ENST00000416186 393 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.56□□□□□ -2
CSDE1O75534 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
CSDE1O75534 MTCO2P34-201ENST00000421994 607 ntBASIC2.56□□□□□ -2
CSDE1O75534 ISCA1P1-201ENST00000426679 387 ntBASIC2.56□□□□□ -2
CSDE1O75534 MED13P1-201ENST00000428342 171 ntBASIC2.56□□□□□ -2
CSDE1O75534 RPL23AP30-201ENST00000432419 501 ntBASIC2.56□□□□□ -2
CSDE1O75534 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
CSDE1O75534 KLF3P2-201ENST00000465138 268 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.56□□□□□ -2
CSDE1O75534 RPL23AP49-201ENST00000492925 468 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC093534.1-201ENST00000504977 132 ntBASIC2.56□□□□□ -2
CSDE1O75534 ARL2BPP4-201ENST00000506854 471 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC117522.1-201ENST00000509821 380 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC022447.1-201ENST00000515358 464 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.56□□□□□ -2
CSDE1O75534 Y_RNA.689-201ENST00000516589 107 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.56□□□□□ -2
CSDE1O75534 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.56□□□□□ -2
CSDE1O75534 AC006362.1-201ENST00000567392 174 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC012213.3-201ENST00000577199 777 ntBASIC2.56□□□□□ -2
CSDE1O75534 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.56□□□□□ -2
CSDE1O75534 AC090616.3-201ENST00000582184 217 ntBASIC2.56□□□□□ -2
CSDE1O75534 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
CSDE1O75534 MIR3616-201ENST00000584070 92 ntBASIC2.56□□□□□ -2
CSDE1O75534 RSL24D1P11-201ENST00000591045 491 ntBASIC2.56□□□□□ -2
CSDE1O75534 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.56□□□□□ -2
CSDE1O75534 AC245014.2-201ENST00000603689 287 ntBASIC2.56□□□□□ -2
CSDE1O75534 AC246785.4-201ENST00000605374 287 ntBASIC2.56□□□□□ -2
CSDE1O75534 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
CSDE1O75534 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSDE1O75534 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CSDE1O75534 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSDE1O75534 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSDE1O75534 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSDE1O75534 RNU6-658P-201ENST00000384606 106 ntBASIC2.55□□□□□ -2
CSDE1O75534 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.55□□□□□ -2
CSDE1O75534 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.55□□□□□ -2
CSDE1O75534 U3.37-201ENST00000408528 213 ntBASIC2.55□□□□□ -2
CSDE1O75534 BPY2DP-201ENST00000422208 265 ntBASIC2.55□□□□□ -2
CSDE1O75534 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.55□□□□□ -2
CSDE1O75534 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.55□□□□□ -2
CSDE1O75534 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.55□□□□□ -2
CSDE1O75534 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
CSDE1O75534 AL445687.1-201ENST00000439946 251 ntBASIC2.55□□□□□ -2
CSDE1O75534 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.55□□□□□ -2
CSDE1O75534 MTCO1P19-201ENST00000443487 500 ntBASIC2.55□□□□□ -2
CSDE1O75534 OSTCP8-201ENST00000445117 448 ntBASIC2.55□□□□□ -2
CSDE1O75534 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.55□□□□□ -2
CSDE1O75534 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.55□□□□□ -2
CSDE1O75534 YWHAEP4-201ENST00000505390 198 ntBASIC2.55□□□□□ -2
CSDE1O75534 MTND4P2-201ENST00000507767 1203 ntBASIC2.55□□□□□ -2
CSDE1O75534 SCARNA24.1-201ENST00000516465 137 ntBASIC2.55□□□□□ -2
CSDE1O75534 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
CSDE1O75534 SCARNA11.3-201ENST00000517276 130 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms