Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RNU6-677P-201ENST00000516914 101 ntBASIC3.04□□□□□ -1.92
LDB3O75112 COPS8P3-201ENST00000526024 482 ntBASIC3.04□□□□□ -1.92
LDB3O75112 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LDB3O75112 APOOP3-201ENST00000536787 586 ntBASIC3.04□□□□□ -1.92
LDB3O75112 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB3O75112 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB3O75112 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB3O75112 MIR3672-201ENST00000584290 82 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC012468.1-201ENST00000604888 430 ntBASIC3.04□□□□□ -1.92
LDB3O75112 AC090971.5-201ENST00000621102 293 ntBASIC3.04□□□□□ -1.92
LDB3O75112 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB3O75112 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB3O75112 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB3O75112 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.04□□□□□ -1.92
LDB3O75112 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB3O75112 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
LDB3O75112 AL021368.2-201ENST00000606125 5352 ntBASIC3.04□□□□□ -1.92
LDB3O75112 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB3O75112 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB3O75112 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB3O75112 AC103710.2-202ENST00000641454 2853 ntBASIC3.03□□□□□ -1.92
LDB3O75112 SNORD46.1-201ENST00000364139 104 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RPL5P18-201ENST00000406671 891 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RNA5SP44-201ENST00000410446 133 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB3O75112 OR6C66P-201ENST00000414917 930 ntBASIC3.03□□□□□ -1.92
LDB3O75112 BTF3L4P3-201ENST00000418879 476 ntBASIC3.03□□□□□ -1.92
LDB3O75112 TMEM167AP1-201ENST00000423409 219 ntBASIC3.03□□□□□ -1.92
LDB3O75112 GTF2IP13-201ENST00000438487 386 ntBASIC3.03□□□□□ -1.92
LDB3O75112 FABP5P13-201ENST00000452144 328 ntBASIC3.03□□□□□ -1.92
LDB3O75112 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB3O75112 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.03□□□□□ -1.92
LDB3O75112 RNU7-170P-201ENST00000459303 61 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC087588.1-201ENST00000462203 316 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RN7SL442P-201ENST00000473804 320 ntBASIC3.03□□□□□ -1.92
LDB3O75112 RPL23AP11-201ENST00000475260 469 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC110794.1-201ENST00000505816 425 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC091885.1-201ENST00000506658 268 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.03□□□□□ -1.92
LDB3O75112 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB3O75112 RNU6-1045P-201ENST00000516321 107 ntBASIC3.03□□□□□ -1.92
LDB3O75112 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC090136.1-201ENST00000520009 240 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC004024.1-201ENST00000549244 247 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AL163153.1-201ENST00000554223 283 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC008521.1-201ENST00000587471 187 ntBASIC3.03□□□□□ -1.92
LDB3O75112 AC002545.1-201ENST00000592511 181 ntBASIC3.03□□□□□ -1.92
LDB3O75112 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB3O75112 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.03□□□□□ -1.92
LDB3O75112 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB3O75112 AC034102.8-201ENST00000615146 484 ntBASIC3.03□□□□□ -1.92
LDB3O75112 MIR6076-201ENST00000617521 113 ntBASIC3.03□□□□□ -1.92
LDB3O75112 MTND5P42-201ENST00000637720 498 ntBASIC3.03□□□□□ -1.92
LDB3O75112 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB3O75112 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB3O75112 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
LDB3O75112 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB3O75112 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB3O75112 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.02□□□□□ -1.93
LDB3O75112 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LDB3O75112 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB3O75112 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LDB3O75112 RNU6-1287P-201ENST00000362914 107 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RNU6-1127P-201ENST00000384580 107 ntBASIC3.02□□□□□ -1.93
LDB3O75112 Y_RNA.530-201ENST00000384587 101 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RNU6-1060P-201ENST00000384664 107 ntBASIC3.02□□□□□ -1.93
LDB3O75112 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
LDB3O75112 MIR559-201ENST00000385188 96 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RNY4P36-201ENST00000391116 96 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RNU6-1197P-201ENST00000391183 107 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RPS4XP3-201ENST00000398541 413 ntBASIC3.02□□□□□ -1.93
LDB3O75112 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB3O75112 SKA2P1-201ENST00000425592 390 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AL590383.1-201ENST00000428602 75 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AC236972.2-201ENST00000434979 310 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB3O75112 RPL32P28-201ENST00000443577 397 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RPS15AP27-201ENST00000449183 343 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AC115115.1-201ENST00000449927 248 ntBASIC3.02□□□□□ -1.93
LDB3O75112 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.02□□□□□ -1.93
LDB3O75112 RPL23AP14-201ENST00000468281 468 ntBASIC3.02□□□□□ -1.93
LDB3O75112 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB3O75112 Y_RNA.689-201ENST00000516589 107 ntBASIC3.02□□□□□ -1.93
LDB3O75112 Y_RNA.711-201ENST00000516993 102 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.02□□□□□ -1.93
LDB3O75112 IGKV2-23-201ENST00000518729 323 ntBASIC3.02□□□□□ -1.93
LDB3O75112 MTND4P7-201ENST00000523876 130 ntBASIC3.02□□□□□ -1.93
LDB3O75112 RANP3-201ENST00000530970 276 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AL137161.1-201ENST00000532231 390 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AP000889.2-201ENST00000532684 490 ntBASIC3.02□□□□□ -1.93
LDB3O75112 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB3O75112 OR11H5P-201ENST00000554039 926 ntBASIC3.02□□□□□ -1.93
LDB3O75112 DNAJC8P1-201ENST00000554535 372 ntBASIC3.02□□□□□ -1.93
LDB3O75112 MIR5680-201ENST00000577577 84 ntBASIC3.02□□□□□ -1.93
LDB3O75112 MIR2682-201ENST00000580305 110 ntBASIC3.02□□□□□ -1.93
LDB3O75112 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms