Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.74□□□□□ -1.81
CTNND1O60716 AC118273.2-201ENST00000532092 465 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 AP000867.2-201ENST00000532468 320 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 TRAV37-201ENST00000553906 342 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 AL118558.2-201ENST00000556294 238 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 MIR3941-201ENST00000582572 103 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 AC073539.2-201ENST00000597113 165 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 BNIP3P10-201ENST00000605360 577 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 Z82243.1-201ENST00000609432 473 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 U2.17-201ENST00000611454 95 ntBASIC3.74□□□□□ -1.81
CTNND1O60716 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.74□□□□□ -1.81
CTNND1O60716 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTNND1O60716 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CTNND1O60716 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CTNND1O60716 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNND1O60716 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.73□□□□□ -1.81
CTNND1O60716 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNND1O60716 Y_RNA.378-201ENST00000365652 113 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 RNU1-73P-201ENST00000383971 164 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 SNORA75B-201ENST00000384053 137 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 MT-TL1-201ENST00000386347 75 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RNU6-876P-201ENST00000391295 104 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RPS4XP7-201ENST00000406274 780 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RN7SKP220-201ENST00000410611 288 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 Y_RNA.615-201ENST00000410769 117 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 POLHP1-201ENST00000411806 470 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 BX682237.1-201ENST00000415016 335 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 AL353621.1-201ENST00000418219 243 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RPS15AP6-201ENST00000420703 385 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 AC098614.2-201ENST00000426040 255 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 MTATP6P7-201ENST00000453315 681 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RNU6-1208P-201ENST00000459588 107 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 HMGN2P26-201ENST00000463169 339 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RPS4XP22-201ENST00000480755 780 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 Y_RNA.654-201ENST00000497848 106 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 MTND3P25-201ENST00000509243 135 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 RNU6-572P-201ENST00000516724 80 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 H3F3AP1-201ENST00000559984 334 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.73□□□□□ -1.81
CTNND1O60716 AC092807.2-201ENST00000609367 243 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 MIR7106-201ENST00000612419 65 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNND1O60716 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.73□□□□□ -1.81
CTNND1O60716 U6.99-201ENST00000637524 83 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 MTND5P7-201ENST00000413558 1798 ntBASIC3.73□□□□□ -1.81
CTNND1O60716 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.73□□□□□ -1.81
CTNND1O60716 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNND1O60716 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTNND1O60716 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
CTNND1O60716 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNND1O60716 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNND1O60716 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.72□□□□□ -1.81
CTNND1O60716 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTNND1O60716 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTNND1O60716 Y_RNA.86-201ENST00000363020 111 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 SNORA40C-201ENST00000391285 128 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 RPL26P27-201ENST00000414397 437 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.72□□□□□ -1.81
CTNND1O60716 HSPE1P1-201ENST00000421494 318 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 SKA2P1-201ENST00000425592 390 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 NDUFB1P2-201ENST00000449477 176 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 HMGN2P13-201ENST00000476476 274 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AC079140.5-201ENST00000507882 310 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 SNORA31.19-201ENST00000517079 126 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.72□□□□□ -1.81
CTNND1O60716 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CTNND1O60716 uc_338.25-201ENST00000613756 156 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AP003122.6-201ENST00000623831 495 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AC009033.1-201ENST00000624279 431 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AL137790.1-201ENST00000634283 177 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 AC100810.6-201ENST00000638068 285 ntBASIC3.72□□□□□ -1.81
CTNND1O60716 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CTNND1O60716 AC093536.2-201ENST00000565257 1406 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CTNND1O60716 MIR30E-201ENST00000362104 92 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 RNU6-522P-201ENST00000364497 107 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 Y_RNA.373-201ENST00000365600 103 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTNND1O60716 RNA5SP219-201ENST00000390940 113 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 RNA5SP252-201ENST00000391131 119 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AL356776.1-201ENST00000406574 447 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 RNU6-607P-201ENST00000411283 108 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 NDUFS5P4-201ENST00000412983 318 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AC138393.2-201ENST00000414742 246 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AC009161.1-201ENST00000417306 376 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AL353729.1-201ENST00000425044 720 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AC007560.1-201ENST00000426912 237 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 BX679664.1-201ENST00000434429 253 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AL714022.1-201ENST00000439897 151 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.71□□□□□ -1.82
CTNND1O60716 AL136097.1-201ENST00000456945 913 ntBASIC3.71□□□□□ -1.82
CTNND1O60716 DYNLL1P5-201ENST00000467158 270 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms