Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC009269.6-201ENST00000621778 588 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC091948.2-201ENST00000636510 279 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.28□□□□□ -2.2
SSNA1O43805 RBBP8P1-201ENST00000449447 1844 ntBASIC1.28□□□□□ -2.2
SSNA1O43805 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.28□□□□□ -2.2
SSNA1O43805 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.27□□□□□ -2.21
SSNA1O43805 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.27□□□□□ -2.21
SSNA1O43805 MTND4P23-201ENST00000447723 1363 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 SNORA5B-201ENST00000363786 132 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 RNU6-224P-201ENST00000384055 107 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SSNA1O43805 MTND4P25-201ENST00000441039 533 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.27□□□□□ -2.21
SSNA1O43805 AL078601.1-201ENST00000444542 271 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 PTENP1-201ENST00000447117 1215 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AC017099.1-201ENST00000448261 1028 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SSNA1O43805 RPL39P36-201ENST00000490784 156 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 RNU6-143P-201ENST00000516942 93 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AP003049.1-201ENST00000529418 457 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.27□□□□□ -2.21
SSNA1O43805 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.27□□□□□ -2.21
SSNA1O43805 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.27□□□□□ -2.21
SSNA1O43805 MIR4429-201ENST00000580105 73 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 BNIP3P9-201ENST00000603714 553 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 CYP2C61P-201ENST00000604072 290 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AC010900.2-201ENST00000604508 210 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AP001485.1-201ENST00000604799 199 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 AC012360.2-201ENST00000609349 391 ntBASIC1.27□□□□□ -2.21
SSNA1O43805 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SSNA1O43805 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.26□□□□□ -2.21
SSNA1O43805 ZNF680P1-201ENST00000436625 1469 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 RNU6-858P-201ENST00000362436 107 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 RNU6-1284P-201ENST00000363701 100 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 SNORA48.2-201ENST00000390926 124 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 RNA5SP100-201ENST00000410903 110 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 RNA5SP59-201ENST00000410922 110 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 MTCO1P17-201ENST00000411522 491 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL359704.1-201ENST00000411586 781 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.26□□□□□ -2.21
SSNA1O43805 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.26□□□□□ -2.21
SSNA1O43805 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.26□□□□□ -2.21
SSNA1O43805 AL445669.1-201ENST00000426743 755 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 SDAD1P3-201ENST00000427380 333 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.26□□□□□ -2.21
SSNA1O43805 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.26□□□□□ -2.21
SSNA1O43805 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.26□□□□□ -2.21
SSNA1O43805 COPS8P3-201ENST00000526024 482 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AC087894.1-201ENST00000538359 518 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.26□□□□□ -2.21
SSNA1O43805 MIR3944-201ENST00000581277 108 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.26□□□□□ -2.21
SSNA1O43805 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.26□□□□□ -2.21
SSNA1O43805 VN1R83P-201ENST00000595685 445 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.6-201ENST00000603753 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.11-201ENST00000604059 253 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AC008162.1-201ENST00000604718 254 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.1-201ENST00000604752 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.2-201ENST00000604983 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.5-201ENST00000605253 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.4-201ENST00000605279 254 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.12-201ENST00000605291 253 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.8-201ENST00000605353 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL670379.7-201ENST00000605823 252 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL022345.1-201ENST00000607292 135 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AC093673.2-201ENST00000609674 331 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.26□□□□□ -2.21
SSNA1O43805 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AC084768.2-201ENST00000622736 221 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 AL512643.1-201ENST00000635735 524 ntBASIC1.26□□□□□ -2.21
SSNA1O43805 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SSNA1O43805 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SSNA1O43805 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SSNA1O43805 RNU6-1010P-201ENST00000362757 107 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 RNU6-166P-201ENST00000384371 107 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 SNORA40C-201ENST00000391285 128 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 RNU2-36P-201ENST00000410361 191 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 RN7SKP284-201ENST00000411002 343 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC083875.1-201ENST00000419509 405 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.25□□□□□ -2.21
SSNA1O43805 NEFMP1-201ENST00000443423 1006 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 ZNF886P-201ENST00000450781 723 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 HSPE1P24-201ENST00000450782 238 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 USP9YP10-201ENST00000454868 628 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 MED28P2-201ENST00000475771 317 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 RNU6-965P-201ENST00000516721 96 ntBASIC1.25□□□□□ -2.21
SSNA1O43805 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.25□□□□□ -2.21
SSNA1O43805 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms