Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC244517.12-201ENST00000623581 663 ntBASIC3.28□□□□□ -1.88
SMAD6O43541 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SMAD6O43541 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 Y_RNA.197-201ENST00000364004 102 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RNU6-1078P-201ENST00000364522 103 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RNU5E-6P-201ENST00000365574 115 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RNU6-639P-201ENST00000384074 107 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 SNORA24.1-201ENST00000384401 135 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AL592114.1-201ENST00000403842 483 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RN7SKP158-201ENST00000410453 326 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RNA5SP107-201ENST00000411358 122 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 RPL37P10-201ENST00000412884 288 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AC113618.1-201ENST00000416747 285 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD6O43541 PMCHL1-202ENST00000423102 261 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 AL353705.1-201ENST00000433468 480 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 RPL32P28-201ENST00000443577 397 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD6O43541 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
SMAD6O43541 TRBVA-201ENST00000498804 316 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.27□□□□□ -1.89
SMAD6O43541 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.27□□□□□ -1.89
SMAD6O43541 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.27□□□□□ -1.89
SMAD6O43541 MIR4293-201ENST00000584305 78 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 XIAPP1-201ENST00000603162 600 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 AC004832.5-201ENST00000608677 401 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 Z82243.1-201ENST00000609432 473 ntBASIC3.27□□□□□ -1.89
SMAD6O43541 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.27□□□□□ -1.89
SMAD6O43541 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.27□□□□□ -1.89
SMAD6O43541 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMAD6O43541 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD6O43541 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
SMAD6O43541 AC121333.1-201ENST00000567488 2709 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
SMAD6O43541 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD6O43541 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD6O43541 RNU6-1249P-201ENST00000363237 111 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 Y_RNA.187-201ENST00000363918 113 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 RNU6-61P-201ENST00000365528 109 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD6O43541 Y_RNA.576-201ENST00000384781 102 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
SMAD6O43541 RNU4-47P-201ENST00000410876 114 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 MTATP6P4-201ENST00000427725 675 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC093106.2-201ENST00000428212 385 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD6O43541 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD6O43541 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.26□□□□□ -1.89
SMAD6O43541 CST9LP2-201ENST00000437612 320 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC005094.1-201ENST00000440420 368 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 IPO7P1-201ENST00000442031 636 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 RN7SL863P-201ENST00000462370 296 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC109925.1-201ENST00000478069 331 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 RPL7P43-201ENST00000478876 753 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC135721.1-201ENST00000497954 479 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 RN7SKP24-201ENST00000515888 284 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 SNORA74D-201ENST00000516404 141 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 RNU6-566P-201ENST00000516790 107 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC090136.1-201ENST00000520009 240 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 ERHP1-201ENST00000523006 310 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMAD6O43541 AL137161.1-201ENST00000532231 390 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
SMAD6O43541 MIR4790-201ENST00000577799 79 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC012443.1-201ENST00000605605 231 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AC022893.3-201ENST00000607665 437 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 uc_338.11-201ENST00000619132 160 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 AL360181.4-201ENST00000621752 134 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 uc_338.22-201ENST00000622722 187 ntBASIC3.26□□□□□ -1.89
SMAD6O43541 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMAD6O43541 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.26□□□□□ -1.89
SMAD6O43541 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.25□□□□□ -1.89
SMAD6O43541 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SMAD6O43541 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD6O43541 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.25□□□□□ -1.89
SMAD6O43541 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD6O43541 Y_RNA.133-201ENST00000363428 110 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 SNORD113-7-201ENST00000363762 77 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 RNU6-574P-201ENST00000384265 107 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 SNORD51-201ENST00000384320 80 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 RNU6-463P-201ENST00000384340 107 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 AL356057.3-201ENST00000402607 340 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 RNU6-516P-201ENST00000411381 104 ntBASIC3.25□□□□□ -1.89
SMAD6O43541 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms