Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR105-2-201ENST00000385083 81 ntBASIC8.08□□□□□ -1.12
MSH5O43196 AP000567.1-201ENST00000406413 156 ntBASIC8.08□□□□□ -1.12
MSH5O43196 U3.43-201ENST00000410734 213 ntBASIC8.08□□□□□ -1.12
MSH5O43196 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC8.08□□□□□ -1.12
MSH5O43196 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.08□□□□□ -1.12
MSH5O43196 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
MSH5O43196 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.08□□□□□ -1.12
MSH5O43196 AC024255.1-201ENST00000614376 102 ntBASIC8.08□□□□□ -1.12
MSH5O43196 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC8.08□□□□□ -1.12
MSH5O43196 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
MSH5O43196 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
MSH5O43196 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
MSH5O43196 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
MSH5O43196 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
MSH5O43196 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 SNORD115-39-201ENST00000363694 82 ntBASIC8.07□□□□□ -1.12
MSH5O43196 MIR137-201ENST00000385223 102 ntBASIC8.07□□□□□ -1.12
MSH5O43196 AP000281.1-201ENST00000444036 316 ntBASIC8.07□□□□□ -1.12
MSH5O43196 RNA5SP434-201ENST00000516647 121 ntBASIC8.07□□□□□ -1.12
MSH5O43196 MYL6-213ENST00000549017 502 ntTSL 3 BASIC8.07□□□□□ -1.12
MSH5O43196 EIF4A1P12-201ENST00000551910 141 ntBASIC8.07□□□□□ -1.12
MSH5O43196 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.07□□□□□ -1.12
MSH5O43196 AC022404.1-201ENST00000555320 273 ntBASIC8.07□□□□□ -1.12
MSH5O43196 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.07□□□□□ -1.12
MSH5O43196 AC106785.4-201ENST00000569492 412 ntBASIC8.07□□□□□ -1.12
MSH5O43196 AC090897.2-201ENST00000581715 130 ntBASIC8.07□□□□□ -1.12
MSH5O43196 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
MSH5O43196 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
MSH5O43196 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
MSH5O43196 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
MSH5O43196 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
MSH5O43196 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
MSH5O43196 OR9K1P-202ENST00000641111 3217 ntBASIC8.06□□□□□ -1.12
MSH5O43196 SNORA58B-201ENST00000364259 136 ntBASIC8.06□□□□□ -1.12
MSH5O43196 SNORA1.1-201ENST00000364671 133 ntBASIC8.06□□□□□ -1.12
MSH5O43196 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.06□□□□□ -1.12
MSH5O43196 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.06□□□□□ -1.12
MSH5O43196 RNA5SP201-201ENST00000410316 124 ntBASIC8.06□□□□□ -1.12
MSH5O43196 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC8.06□□□□□ -1.12
MSH5O43196 RNA5SP440-201ENST00000612665 119 ntBASIC8.06□□□□□ -1.12
MSH5O43196 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
MSH5O43196 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
MSH5O43196 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
MSH5O43196 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
MSH5O43196 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC8.05□□□□□ -1.12
MSH5O43196 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
MSH5O43196 SNORA21-201ENST00000362423 132 ntBASIC8.05□□□□□ -1.12
MSH5O43196 RNU6-663P-201ENST00000391105 106 ntBASIC8.05□□□□□ -1.12
MSH5O43196 NME1P1-201ENST00000420914 382 ntBASIC8.05□□□□□ -1.12
MSH5O43196 AC090844.1-201ENST00000422019 156 ntBASIC8.05□□□□□ -1.12
MSH5O43196 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC8.05□□□□□ -1.12
MSH5O43196 RPS4XP11-201ENST00000446897 772 ntBASIC8.05□□□□□ -1.12
MSH5O43196 AL445665.1-202ENST00000452436 324 ntBASIC8.05□□□□□ -1.12
MSH5O43196 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC8.05□□□□□ -1.12
MSH5O43196 AL034555.1-201ENST00000604816 211 ntBASIC8.05□□□□□ -1.12
MSH5O43196 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC8.05□□□□□ -1.12
MSH5O43196 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 INTS6P1-201ENST00000504674 2530 ntBASIC8.05□□□□□ -1.12
MSH5O43196 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.05□□□□□ -1.12
MSH5O43196 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC8.05□□□□□ -1.12
MSH5O43196 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.05□□□□□ -1.12
MSH5O43196 AC091152.2-201ENST00000591628 2569 ntBASIC8.05□□□□□ -1.12
MSH5O43196 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.05□□□□□ -1.12
MSH5O43196 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
MSH5O43196 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
MSH5O43196 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
MSH5O43196 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.04□□□□□ -1.12
MSH5O43196 PARP4P2-201ENST00000446672 3326 ntBASIC8.04□□□□□ -1.12
MSH5O43196 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
MSH5O43196 RNU6-624P-201ENST00000363411 107 ntBASIC8.04□□□□□ -1.12
MSH5O43196 RNU6-1189P-201ENST00000383958 107 ntBASIC8.04□□□□□ -1.12
MSH5O43196 RNU6ATAC10P-201ENST00000408635 111 ntBASIC8.04□□□□□ -1.12
MSH5O43196 HMGA1P8-201ENST00000414130 321 ntBASIC8.04□□□□□ -1.12
MSH5O43196 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 AC079780.1-201ENST00000428259 207 ntBASIC8.04□□□□□ -1.12
MSH5O43196 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 SNORD65B-201ENST00000459126 73 ntBASIC8.04□□□□□ -1.12
MSH5O43196 AC010598.1-201ENST00000510378 103 ntBASIC8.04□□□□□ -1.12
MSH5O43196 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.04□□□□□ -1.12
MSH5O43196 AC136777.2-201ENST00000522979 358 ntBASIC8.04□□□□□ -1.12
MSH5O43196 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
MSH5O43196 AC005520.4-201ENST00000604337 90 ntBASIC8.04□□□□□ -1.12
MSH5O43196 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 MFSD8-239ENST00000641590 2479 ntBASIC8.04□□□□□ -1.12
MSH5O43196 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
MSH5O43196 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms