Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC097463.2-201ENST00000421074 142 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AL591704.1-201ENST00000432574 275 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN3O15551 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN3O15551 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN3O15551 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 FABP5P13-201ENST00000452144 328 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AC068587.2-201ENST00000478386 781 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN3O15551 Y_RNA.689-201ENST00000516589 107 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AL157871.3-201ENST00000557231 293 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 AC091489.2-201ENST00000566263 604 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AL138963.2-201ENST00000605137 226 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 AC105129.3-201ENST00000605455 485 ntBASIC2.32□□□□□ -2.04
CLDN3O15551 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN3O15551 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN3O15551 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN3O15551 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN3O15551 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN3O15551 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RNU5F-6P-201ENST00000362979 116 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RNU5F-7P-201ENST00000363696 115 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 MTCYBP36-201ENST00000404146 440 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RN7SKP158-201ENST00000410453 326 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RNU2-63P-201ENST00000410792 194 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 NPM1P11-201ENST00000417106 855 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN3O15551 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN3O15551 MTND1P12-201ENST00000455231 147 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RPS3AP22-201ENST00000488297 769 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 FAM92A1P2-202ENST00000504766 877 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN3O15551 AC109927.2-201ENST00000506416 303 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AF213884.2-201ENST00000510417 903 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 MRPS33P3-201ENST00000513456 322 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 RNU7-51P-201ENST00000516560 62 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN3O15551 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.31□□□□□ -2.04
CLDN3O15551 AC012435.1-202ENST00000568772 240 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 MIR6840-201ENST00000611937 71 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AC087241.4-201ENST00000612441 480 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AL050303.3-201ENST00000613704 284 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AC010378.1-201ENST00000619270 362 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 AC024581.2-201ENST00000619986 252 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.31□□□□□ -2.04
CLDN3O15551 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN3O15551 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.31□□□□□ -2.04
CLDN3O15551 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN3O15551 CKAP2P1-201ENST00000555477 2049 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CLDN3O15551 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN3O15551 Y_RNA.33-201ENST00000362591 102 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 RNU6-960P-201ENST00000364056 120 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 SNORA40C-201ENST00000391285 128 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC009518.2-201ENST00000418056 731 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.3□□□□□ -2.04
CLDN3O15551 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN3O15551 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN3O15551 AL365184.2-201ENST00000431139 435 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC119618.1-201ENST00000434191 222 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AL008629.1-201ENST00000438615 184 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC124916.1-201ENST00000444020 547 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AL590365.1-201ENST00000450788 243 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC090515.1-201ENST00000465295 476 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC068781.1-201ENST00000488231 618 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.3□□□□□ -2.04
CLDN3O15551 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN3O15551 MRPS36P3-201ENST00000519284 130 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.3□□□□□ -2.04
CLDN3O15551 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
CLDN3O15551 RPS3AP23-202ENST00000574601 686 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.3□□□□□ -2.04
CLDN3O15551 AC174048.1-201ENST00000603389 144 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 MIR15A-201ENST00000607334 83 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 AC244517.12-201ENST00000623581 663 ntBASIC2.3□□□□□ -2.04
CLDN3O15551 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CLDN3O15551 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLDN3O15551 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CLDN3O15551 HSPA8P4-201ENST00000511877 1920 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 SNORA72.3-201ENST00000365074 132 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN3O15551 WARS2P1-201ENST00000429678 537 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.29□□□□□ -2.04
CLDN3O15551 RPL23AP30-201ENST00000432419 501 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AL353706.1-201ENST00000436728 494 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 PGBD4P3-201ENST00000440731 581 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.29□□□□□ -2.04
CLDN3O15551 AC109486.1-201ENST00000486833 374 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AC140059.1-201ENST00000489238 361 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AC007182.2-201ENST00000489251 402 ntBASIC2.29□□□□□ -2.04
CLDN3O15551 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms