Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RAC1P7-201ENST00000445367 377 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 MTND1P17-201ENST00000448961 204 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC004801.2-202ENST00000463559 283 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC087879.1-201ENST00000474343 374 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 AC068305.1-201ENST00000497406 726 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN1O15353 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
FOXN1O15353 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN1O15353 MRPS35P2-201ENST00000508242 191 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC107222.1-201ENST00000510899 637 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN1O15353 AC104136.1-201ENST00000512969 394 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 RNU6-635P-201ENST00000516651 102 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AP005902.1-201ENST00000521358 186 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN1O15353 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXN1O15353 MIR4319-201ENST00000577285 85 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC090615.1-201ENST00000577519 154 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXN1O15353 AL365434.2-201ENST00000607979 234 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 RMST_8.1-201ENST00000610287 165 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AL596245.1-201ENST00000618994 362 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AP003355.3-201ENST00000623465 114 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AL669831.3-213ENST00000636676 183 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 AC008725.1-201ENST00000605123 2263 ntBASIC3.94□□□□□ -1.78
FOXN1O15353 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXN1O15353 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXN1O15353 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
FOXN1O15353 AL356274.2-201ENST00000624379 3752 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN1O15353 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN1O15353 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 RNU6-511P-201ENST00000363496 107 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RNU6-1243P-201ENST00000364028 107 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 Y_RNA.212-201ENST00000364177 102 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC019155.1-201ENST00000382242 574 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 SNORD116-11-201ENST00000383882 92 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 Y_RNA.463-201ENST00000384271 102 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RNY1P14-201ENST00000384426 108 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN1O15353 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN1O15353 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXN1O15353 TOMM20P4-201ENST00000427861 435 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 MYL8P-204ENST00000431574 518 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 HMGB1P12-201ENST00000438594 598 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC108938.1-201ENST00000451204 136 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC104073.1-201ENST00000451988 151 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC093767.1-201ENST00000504523 156 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC097473.1-201ENST00000508142 408 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 Y_RNA.661-201ENST00000516003 99 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RNU6-388P-201ENST00000517012 105 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RNU6-389P-201ENST00000517048 105 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 AL161713.1-201ENST00000555538 145 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
FOXN1O15353 AC023043.2-201ENST00000589678 1026 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 BNIP3P16-201ENST00000589779 534 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC092747.3-201ENST00000603769 301 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 AC006157.1-201ENST00000611750 366 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 U6.114-201ENST00000636407 96 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXN1O15353 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXN1O15353 TNPO1P3-201ENST00000436471 2662 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
FOXN1O15353 AL133412.1-201ENST00000380194 2992 ntBASIC3.93□□□□□ -1.78
FOXN1O15353 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
FOXN1O15353 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXN1O15353 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN1O15353 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXN1O15353 Y_RNA.153-201ENST00000363615 91 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 SNORA75B-201ENST00000384053 137 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 RNU6-890P-201ENST00000384121 107 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXN1O15353 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN1O15353 POLHP1-201ENST00000411806 470 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC114491.1-201ENST00000416095 246 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN1O15353 MRPS18BP2-201ENST00000434310 759 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC108059.3-201ENST00000456388 214 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 RN7SL594P-201ENST00000470590 287 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC128713.1-201ENST00000471495 306 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXN1O15353 AC015911.1-201ENST00000495111 156 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXN1O15353 AC008885.1-201ENST00000514930 301 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 RNU7-51P-201ENST00000516560 62 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC009812.2-201ENST00000517657 457 ntBASIC3.92□□□□□ -1.78
FOXN1O15353 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms