Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 Y_RNA.704-201ENST00000516851 102 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAFD1O14545 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAFD1O14545 HSPE1P20-201ENST00000538133 289 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAFD1O14545 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAFD1O14545 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAFD1O14545 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRAFD1O14545 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.61□□□□□ -1.99
TRAFD1O14545 AC010546.1-201ENST00000569391 485 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 EIF1P4-201ENST00000572664 335 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.61□□□□□ -1.99
TRAFD1O14545 AC092954.2-201ENST00000609103 430 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAFD1O14545 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 AC025034.2-201ENST00000623264 286 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 AC092608.2-201ENST00000624427 218 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAFD1O14545 SEPT14P19-203ENST00000633205 211 ntBASIC2.61□□□□□ -1.99
TRAFD1O14545 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
TRAFD1O14545 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAFD1O14545 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
TRAFD1O14545 ZNF680P1-201ENST00000436625 1469 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU6-179P-201ENST00000363350 107 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU6-61P-201ENST00000365528 109 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU6-741P-201ENST00000383889 107 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU6-190P-201ENST00000384154 102 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU6-198P-201ENST00000384258 104 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 Y_RNA.554-201ENST00000384672 102 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 MTCO3P40-201ENST00000392516 676 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 U3.37-201ENST00000408528 213 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RNU2-33P-201ENST00000410344 192 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RPS12P24-201ENST00000412619 387 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AL031779.1-201ENST00000415663 330 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AL591212.2-201ENST00000433923 257 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRAFD1O14545 RPL12P25-201ENST00000455592 494 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 SRRM1P2-201ENST00000464531 1192 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 MRPS17P3-201ENST00000465453 385 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 RPS20P22-201ENST00000473700 357 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC126389.1-201ENST00000477436 290 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.6□□□□□ -1.99
TRAFD1O14545 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.6□□□□□ -1.99
TRAFD1O14545 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.6□□□□□ -1.99
TRAFD1O14545 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAFD1O14545 RPS3AP4-201ENST00000555161 764 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.6□□□□□ -1.99
TRAFD1O14545 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.6□□□□□ -1.99
TRAFD1O14545 AC104763.2-201ENST00000604179 382 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC022893.3-201ENST00000607665 437 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC034102.8-201ENST00000615146 484 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AC139792.3-201ENST00000623525 224 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 AL359740.1-201ENST00000624340 592 ntBASIC2.6□□□□□ -1.99
TRAFD1O14545 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAFD1O14545 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
TRAFD1O14545 SNORD62.1-201ENST00000362541 86 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 RNA5SP68-201ENST00000363885 119 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 Y_RNA.245-201ENST00000364493 95 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 RNU6-1103P-201ENST00000384150 107 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 Y_RNA.576-201ENST00000384781 102 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 CISD1P1-201ENST00000393907 327 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 RPS4XP8-201ENST00000402039 771 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 MIR548F1-201ENST00000408667 84 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 Y_RNA.599-201ENST00000410489 109 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.59□□□□□ -1.99
TRAFD1O14545 UBE2V1P10-201ENST00000414685 269 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 ZNF90P2-204ENST00000419323 1075 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAFD1O14545 ZNF885P-201ENST00000420174 1098 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAFD1O14545 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.59□□□□□ -1.99
TRAFD1O14545 Z82210.1-201ENST00000440037 231 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAFD1O14545 RPL37P6-201ENST00000460682 294 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL160314.1-201ENST00000490836 438 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC009646.1-201ENST00000510455 318 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 RNU6-677P-201ENST00000516914 101 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.59□□□□□ -1.99
TRAFD1O14545 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.59□□□□□ -1.99
TRAFD1O14545 TRAV28-201ENST00000557548 323 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC008752.3-201ENST00000588113 712 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.59□□□□□ -1.99
TRAFD1O14545 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AC012507.3-201ENST00000603556 477 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL670379.4-201ENST00000605279 254 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL365204.3-201ENST00000612448 685 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL161629.2-201ENST00000615347 275 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 MTND5P42-201ENST00000637720 498 ntBASIC2.59□□□□□ -1.99
TRAFD1O14545 AL049641.1-201ENST00000441055 1948 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms