Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 OR4G1P-203ENST00000641984 1631 ntBASIC0.56□□□□□ -2.32
HMGN4O00479 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HMGN4O00479 RNA5SP432-201ENST00000362480 116 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HMGN4O00479 RNU6-878P-201ENST00000384578 110 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 Z86062.1-201ENST00000406773 777 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 PPP1R11P2-201ENST00000423543 382 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 FO393414.1-201ENST00000428697 1184 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGN4O00479 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AL078601.1-201ENST00000444542 271 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HMGN4O00479 RPS20P20-201ENST00000460498 340 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 RPL9P9-202ENST00000466501 579 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AP001025.1-201ENST00000486139 332 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGN4O00479 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGN4O00479 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.55□□□□□ -2.32
HMGN4O00479 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGN4O00479 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 ROCK1P1-201ENST00000573767 549 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 FAM106DP-201ENST00000586416 501 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.55□□□□□ -2.32
HMGN4O00479 GAS5-AS1-201ENST00000602767 694 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC242628.1-201ENST00000606810 391 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC004492.1-201ENST00000607036 742 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC024257.5-201ENST00000612739 531 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AC083806.3-201ENST00000614016 455 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AL078604.3-201ENST00000615580 211 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 AL590396.2-201ENST00000636511 1041 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 U2.21-201ENST00000637295 81 ntBASIC0.55□□□□□ -2.32
HMGN4O00479 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MIR302D-201ENST00000362275 68 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MIR337-201ENST00000362281 93 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 RNU6-778P-201ENST00000363269 103 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
HMGN4O00479 RNU6-26P-201ENST00000383985 107 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 RNU6-891P-201ENST00000384280 111 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MIR520E-201ENST00000384867 87 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MIR1276-201ENST00000408707 83 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.54□□□□□ -2.32
HMGN4O00479 CCDC58P2-201ENST00000417131 366 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MTCO3P17-201ENST00000443775 513 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AC245102.2-201ENST00000448956 180 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 USP9YP34-201ENST00000453983 808 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 RPL36AP48-201ENST00000485521 314 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 OR9N1P-202ENST00000494289 481 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 RNU6-667P-201ENST00000517186 102 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.54□□□□□ -2.32
HMGN4O00479 AP006587.4-201ENST00000526053 529 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 MTATP6P3-201ENST00000581686 676 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.54□□□□□ -2.32
HMGN4O00479 AC069304.2-201ENST00000605154 435 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AL020996.3-201ENST00000606617 222 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 AL109620.1-201ENST00000618738 1197 ntBASIC0.54□□□□□ -2.32
HMGN4O00479 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.54□□□□□ -2.32
HMGN4O00479 SNORA29-201ENST00000384183 140 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 MIR1262-201ENST00000408276 93 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 USP9YP26-201ENST00000421008 661 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 AC013410.2-201ENST00000422627 201 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 USP9YP18-201ENST00000425912 695 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 PSMA6P3-201ENST00000428242 164 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 USP9YP17-201ENST00000444617 696 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.53□□□□□ -2.32
HMGN4O00479 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HMGN4O00479 SNORA25.11-201ENST00000515935 105 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.53□□□□□ -2.32
HMGN4O00479 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.53□□□□□ -2.32
HMGN4O00479 HSPE1P4-201ENST00000550617 308 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 SNORA77B-201ENST00000578179 125 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 BNIP3P27-201ENST00000599991 412 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.53□□□□□ -2.32
HMGN4O00479 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.53□□□□□ -2.33
HMGN4O00479 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HMGN4O00479 RNU1-124P-201ENST00000363861 145 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 SNORD1A-201ENST00000364968 72 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 RNU1-36P-201ENST00000365130 165 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 SNORD114-22-201ENST00000365423 72 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 SNORA48.1-201ENST00000390879 135 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 RNU6-564P-201ENST00000410983 104 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC006461.1-201ENST00000412637 326 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 CR848007.2-201ENST00000424918 787 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 PTGES3P4-201ENST00000426243 356 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 PTGES3P1-201ENST00000439531 483 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC027119.1-201ENST00000440877 241 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN4O00479 AC079140.2-201ENST00000506193 142 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN4O00479 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.52□□□□□ -2.33
HMGN4O00479 SNORD116-28-201ENST00000516123 91 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 ARL2BPP5-201ENST00000523141 481 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.52□□□□□ -2.33
HMGN4O00479 MIR4781-201ENST00000585250 76 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC104820.1-201ENST00000624183 307 ntBASIC0.52□□□□□ -2.33
HMGN4O00479 AC008163.1-202ENST00000636004 2889 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms