Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.194-201ENST00000363985 102 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 RNU4-48P-201ENST00000365559 182 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 Y_RNA.436-201ENST00000384097 102 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 RNU6-1029P-201ENST00000384109 107 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 RNU6-1179P-201ENST00000384667 107 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 Y_RNA.559-201ENST00000384686 107 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MIR578-201ENST00000384828 96 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 OR6C66P-201ENST00000414917 930 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC096649.2-201ENST00000416186 393 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MTATP6P18-201ENST00000417994 673 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 CALM2P2-201ENST00000428512 440 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC073464.1-201ENST00000429823 534 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MYL8P-204ENST00000431574 518 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC104058.1-201ENST00000448028 297 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC079382.1-201ENST00000493346 557 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC026801.1-201ENST00000497178 464 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AIG1P1-201ENST00000503376 148 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MTCO3P7-201ENST00000510008 774 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC112206.3-201ENST00000514578 389 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 RNA5SP503-201ENST00000517047 117 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 FAM92A1P1-201ENST00000528023 890 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC009063.1-201ENST00000563342 702 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AL138889.2-201ENST00000603883 242 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AL020991.1-201ENST00000612314 373 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 U6.42-201ENST00000618440 107 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC010338.1-201ENST00000621823 717 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
NPIPA3F8WFD2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 MTND5P19-201ENST00000424872 1794 ntBASIC2.56□□□□□ -2
NPIPA3F8WFD2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 RPL9P7-201ENST00000330965 580 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 MIR449A-201ENST00000362113 91 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 Y_RNA.159-201ENST00000363674 87 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 RNU6-1280P-201ENST00000365211 107 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 RNU2-66P-201ENST00000410650 161 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 BX682237.1-201ENST00000415016 335 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 RPL21P90-201ENST00000415692 466 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 MTCYBP5-201ENST00000423752 1135 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 DLGAP5P1-201ENST00000430307 464 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC000111.3-201ENST00000433478 193 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC003071.1-201ENST00000451219 789 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 BTF3P15-201ENST00000455606 336 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC117522.3-201ENST00000507974 584 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 HPRT1P3-201ENST00000539521 576 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AC025678.1-201ENST00000567861 338 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
NPIPA3F8WFD2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.55□□□□□ -2
NPIPA3F8WFD2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
NPIPA3F8WFD2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC004944.1-201ENST00000517807 3059 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 ZNF680P1-201ENST00000436625 1469 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC004520.1-201ENST00000608362 1413 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 RNU6-1120P-201ENST00000362988 108 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 RNU4-24P-201ENST00000364565 139 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 RNU6-550P-201ENST00000391057 101 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 Y_RNA.623-201ENST00000411128 95 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 EEF1A1P40-201ENST00000412883 573 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC002486.1-201ENST00000435098 391 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 OSTCP8-201ENST00000445117 448 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 SNORD109B-201ENST00000458961 67 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 SNORD109A-201ENST00000459128 67 ntBASIC2.54□□□□□ -2
NPIPA3F8WFD2 RPL23AP70-201ENST00000483361 460 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms