Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC103996.1-201ENST00000555468 102 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC005357.1-201ENST00000588399 301 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC125232.2-201ENST00000592457 143 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 AC006023.2-201ENST00000609916 167 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 FAM35DP-201ENST00000323387 2712 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 MTND5P7-201ENST00000413558 1798 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 ZNF299P-201ENST00000406845 1804 ntBASIC3.14□□□□□ -1.91
LINC01548A6NM66 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC01548A6NM66 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01548A6NM66 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 Y_RNA.222-201ENST00000364264 102 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 RNU6-806P-201ENST00000365147 105 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 DEFB109C-201ENST00000382575 264 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 DEFB109B-201ENST00000382656 264 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 Y_RNA.447-201ENST00000384184 113 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 SNORA51.11-201ENST00000384442 131 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 SNORA57.1-201ENST00000391227 145 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC007560.1-201ENST00000426912 237 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 TOMM20P4-201ENST00000427861 435 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 ARL5AP4-201ENST00000430731 512 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AL159987.2-201ENST00000432754 307 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 RPS29P7-201ENST00000439662 171 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 NDUFB1P2-201ENST00000449477 176 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 U8.21-201ENST00000459536 136 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 PPIAP15-201ENST00000479662 484 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 RNU6-397P-201ENST00000516226 104 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 RNY3P15-201ENST00000516297 97 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 SNORA70.16-201ENST00000516390 95 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 SNORA31.19-201ENST00000517079 126 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC023157.2-201ENST00000540596 141 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC106785.1-201ENST00000565935 262 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC090517.1-201ENST00000569307 266 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 RN7SL703P-201ENST00000578485 302 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC053481.4-201ENST00000583164 216 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC008121.1-201ENST00000603244 268 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 MTND4LP5-201ENST00000605152 292 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AL355810.1-201ENST00000614629 552 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC078938.1-201ENST00000620993 318 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 MIR4727-201ENST00000622232 55 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 BMS1P21-201ENST00000634565 365 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
LINC01548A6NM66 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01548A6NM66 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01548A6NM66 MTND5P9-201ENST00000503854 1755 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.12□□□□□ -1.91
LINC01548A6NM66 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01548A6NM66 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01548A6NM66 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01548A6NM66 RNU6-428P-201ENST00000362942 107 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 Y_RNA.288-201ENST00000364854 92 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01548A6NM66 RNU6-741P-201ENST00000383889 107 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 RNU6-213P-201ENST00000384051 104 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 Y_RNA.483-201ENST00000384380 101 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 RNU6-1026P-201ENST00000384465 108 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 MT-TW-201ENST00000387382 68 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LINC01548A6NM66 SNORA40C-201ENST00000391285 128 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 ELOCP20-201ENST00000422460 345 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 MTND3P9-201ENST00000429526 346 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 AL627311.1-201ENST00000431514 115 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.12□□□□□ -1.91
LINC01548A6NM66 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.12□□□□□ -1.91
LINC01548A6NM66 AC073910.1-201ENST00000445047 438 ntBASIC3.12□□□□□ -1.91
LINC01548A6NM66 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms