Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC034114.1-201ENST00000520293 285 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.35-201ENST00000362601 101 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RPS27P23-201ENST00000487608 251 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC022254.1-201ENST00000567857 235 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 HMGN1P30-201ENST00000589286 268 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC104763.3-201ENST00000613765 618 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 AC087821.2-201ENST00000637086 450 ntBASIC0.49□□□□□ -2.33
CNOT1A5YKK6 RNA5SP212-201ENST00000391223 107 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 DYNLT3P2-201ENST00000442517 295 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 SNORA14.1-201ENST00000516113 141 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AP003327.1-201ENST00000529684 127 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AC011260.1-201ENST00000578420 472 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AL078604.3-201ENST00000615580 211 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 RNY4P24-201ENST00000362735 96 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.453-201ENST00000384223 109 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AC245047.4-201ENST00000433189 144 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 SNRPEP7-201ENST00000438350 220 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.644-201ENST00000459006 113 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 Y_RNA.654-201ENST00000497848 106 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AC005668.1-201ENST00000571142 476 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 AC068057.2-201ENST00000624047 895 ntBASIC0.48□□□□□ -2.33
CNOT1A5YKK6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
CNOT1A5YKK6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.47□□□□□ -2.33
CNOT1A5YKK6 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 RNA5SP165-201ENST00000517142 115 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.47□□□□□ -2.33
CNOT1A5YKK6 HSPE1P19-201ENST00000603327 295 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AP001485.1-201ENST00000604799 199 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CNOT1A5YKK6 RNU6-1243P-201ENST00000364028 107 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 RNU6-338P-201ENST00000383888 105 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 RNU6-939P-201ENST00000384634 107 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AC013410.2-201ENST00000422627 201 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 GTF2IP20-201ENST00000431663 360 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AC111193.1-201ENST00000504097 155 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AC024060.1-201ENST00000607052 494 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AP002826.1-201ENST00000608835 315 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 AC012676.2-201ENST00000619258 186 ntBASIC0.47□□□□□ -2.33
CNOT1A5YKK6 RNA5SP240-201ENST00000365355 128 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 RNU2-63P-201ENST00000410792 194 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AL353706.1-201ENST00000436728 494 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 RPL7P29-201ENST00000437151 728 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 RNU6-322P-201ENST00000516010 103 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC104997.1-201ENST00000519761 717 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC012435.1-202ENST00000568772 240 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AL138478.1-201ENST00000612252 832 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AL590410.1-201ENST00000617925 333 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 Y_RNA.67-201ENST00000362870 100 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 SNORA51.10-201ENST00000384418 136 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 YWHAZP8-201ENST00000436935 731 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.46□□□□□ -2.34
CNOT1A5YKK6 AC079140.2-201ENST00000506193 142 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 MIR4422-201ENST00000581938 83 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 NIFKP6-201ENST00000598115 845 ntBASIC0.46□□□□□ -2.34
CNOT1A5YKK6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC023141.4-201ENST00000412031 328 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 RPL39P28-201ENST00000465655 155 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AL359212.1-201ENST00000556608 614 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 DUXAP1-201ENST00000556632 463 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AL356432.3-201ENST00000568952 465 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 Y_RNA.25-201ENST00000362528 102 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
CNOT1A5YKK6 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 HMGB1P17-201ENST00000403495 628 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 RPL37P10-201ENST00000412884 288 ntBASIC0.45□□□□□ -2.34
CNOT1A5YKK6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms