Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL365400.1-201ENST00000431854 640 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 TRIM60P13-201ENST00000432350 1283 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 RPS4XP11-201ENST00000446897 772 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-581P-201ENST00000516214 105 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 MIR6857-201ENST00000613267 93 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC008121.3-201ENST00000618726 433 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC012676.2-201ENST00000619258 186 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 AC006213.5-201ENST00000619673 288 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 MTCO1P9-201ENST00000505577 1534 ntBASIC0.69□□□□□ -2.3
TCRBV3S1A0A5B6 OR5T3-201ENST00000303059 1023 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RNA5SP327-201ENST00000362494 101 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-839P-201ENST00000363347 108 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-26P-201ENST00000383985 107 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 SNORA48.1-201ENST00000390879 135 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AL133264.1-201ENST00000407157 562 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 CYCSP33-201ENST00000414485 327 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RPS23P4-201ENST00000487908 423 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC118282.2-201ENST00000508739 374 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RNVU1-2-201ENST00000516326 135 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-840P-201ENST00000517275 65 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 PSMA3P-201ENST00000555485 635 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC009977.1-201ENST00000586015 570 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC073544.2-201ENST00000601155 540 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC010133.1-201ENST00000615809 842 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
TCRBV3S1A0A5B6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RNU1-58P-201ENST00000362413 163 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RNU5E-1-201ENST00000362477 120 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 SNORD51.1-201ENST00000365405 77 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 SNORD65C-201ENST00000390962 71 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RPL22P22-201ENST00000395439 379 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC004965.1-201ENST00000413033 213 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC245047.4-201ENST00000433189 144 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 MEMO1P3-201ENST00000459811 302 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 MTCYBP16-201ENST00000509187 1129 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC025465.3-201ENST00000510570 311 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RNA5SP404-201ENST00000517118 132 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AP006587.4-201ENST00000526053 529 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RAB11AP2-201ENST00000545905 639 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC002400.1-201ENST00000569310 726 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 MIR3945-201ENST00000581853 98 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC011451.2-201ENST00000604303 598 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RMST_10.1-201ENST00000616309 154 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AL132822.1-201ENST00000617063 513 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 DBF4P1-201ENST00000412976 1892 ntBASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TCRBV3S1A0A5B6 AL391516.1-201ENST00000554380 2449 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 Y_RNA.245-201ENST00000364493 95 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-53P-201ENST00000365367 106 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 MTCO2P31-201ENST00000402702 684 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RN7SKP284-201ENST00000411002 343 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RNU6-575P-201ENST00000411326 105 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 MTCO3P1-205ENST00000422088 832 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC092001.1-201ENST00000453012 261 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 PRELID3BP1-201ENST00000457142 540 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RPL9P9-202ENST00000466501 579 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 RPL7P43-201ENST00000478876 753 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC010409.1-201ENST00000487382 476 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.66□□□□□ -2.3
TCRBV3S1A0A5B6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms