Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 snoU13.15-201ENST00000459407 104 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC087588.1-201ENST00000462203 316 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 RPS27AP10-201ENST00000496103 208 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC079140.3-201ENST00000511111 550 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC009902.1-201ENST00000519351 183 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AP002453.2-201ENST00000533503 320 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 PIGPP4-201ENST00000584447 307 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC008739.2-201ENST00000597006 317 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AL161729.4-201ENST00000604650 476 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC022893.3-201ENST00000607665 437 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AL161629.2-201ENST00000615347 275 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AP001506.1-201ENST00000615444 211 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC010378.1-201ENST00000619270 362 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC009831.4-201ENST00000620744 325 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 MIR7843-201ENST00000622274 79 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC068880.5-201ENST00000624331 290 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AL160394.1-201ENST00000624765 724 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 MIR4275-201ENST00000636486 87 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 AC010680.1-201ENST00000590024 3590 ntBASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV40A0A0B4J280 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
TRAV40A0A0B4J280 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 Y_RNA.77-201ENST00000362962 107 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-799P-201ENST00000363567 107 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 Z98749.2-208ENST00000381646 500 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 Y_RNA.534-201ENST00000384599 112 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 MTND3P17-201ENST00000416968 344 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 C1DP2-201ENST00000418167 426 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 USP9YP27-201ENST00000418455 438 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 DLGAP5P1-201ENST00000430307 464 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC092427.1-202ENST00000430569 476 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 GPM6BP2-201ENST00000432046 144 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RPL36AP53-201ENST00000432891 316 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RPL23AP58-201ENST00000440453 469 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 GPM6BP1-201ENST00000446387 144 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AL122001.1-201ENST00000457027 370 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC093899.1-201ENST00000457984 376 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 KLF3P2-201ENST00000465138 268 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC007182.2-201ENST00000489251 402 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 ARL2BPP4-201ENST00000506854 471 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 SCARNA16.3-201ENST00000516595 184 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RPS3AP4-201ENST00000555161 764 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AL359212.1-201ENST00000556608 614 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC010546.1-201ENST00000569391 485 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 LRRC37A5P-203ENST00000580181 585 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC005261.5-201ENST00000596280 355 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 DUXAP4-201ENST00000603046 613 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC087752.4-201ENST00000605911 462 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 MIR15A-201ENST00000607334 83 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AL365204.3-201ENST00000612448 685 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 AC093648.1-201ENST00000623546 606 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 PISRT1-201ENST00000626175 531 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 MTND5P42-201ENST00000637720 498 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 CKAP2P1-201ENST00000555477 2049 ntBASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV40A0A0B4J280 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 ZNF720P1-201ENST00000562403 1939 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms