Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC002400.1-201ENST00000569310 726 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC098848.2-201ENST00000588023 330 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AL020996.3-201ENST00000606617 222 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC097468.3-201ENST00000607956 456 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AL353997.5-201ENST00000618886 171 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AC004009.2-201ENST00000623016 728 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 AL159972.1-201ENST00000625150 448 ntBASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-2A0A0B4J238 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU6-40P-201ENST00000384254 107 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR222-201ENST00000384992 110 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR506-201ENST00000384998 124 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 MTCYBP38-201ENST00000417160 1123 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC019178.2-201ENST00000423595 505 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC093422.3-201ENST00000428506 305 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 UBE2V2P3-201ENST00000433562 437 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC027119.1-201ENST00000440877 241 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 snoU13.23-201ENST00000458863 104 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC109927.2-201ENST00000506416 303 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 UBL5P1-201ENST00000507979 193 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 SNORD116-28-201ENST00000516123 91 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 RNVU1-2-201ENST00000516326 135 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 RNU6-113P-201ENST00000516653 101 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 PSMA3P-201ENST00000555485 635 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 ADAM3B-201ENST00000569937 840 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 CYP2C61P-201ENST00000604072 290 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC012360.2-201ENST00000609349 391 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AL132822.1-201ENST00000617063 513 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC138627.2-201ENST00000624202 601 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 AC092125.1-201ENST00000562568 1995 ntBASIC0.53□□□□□ -2.32
TRAV1-2A0A0B4J238 OR5T3-201ENST00000303059 1023 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 MIR373-201ENST00000362273 69 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU1-124P-201ENST00000363861 145 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 Y_RNA.327-201ENST00000365201 102 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-1032P-201ENST00000384100 107 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 SNORD14D-201ENST00000384390 87 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC139712.2-201ENST00000424302 339 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 CST2P1-201ENST00000425770 87 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 MTND2P5-201ENST00000432656 1006 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC245102.2-201ENST00000448956 180 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 PRELID3BP1-201ENST00000457142 540 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC112771.1-201ENST00000463581 102 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC011005.2-201ENST00000487324 359 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC010409.1-201ENST00000487382 476 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-678P-201ENST00000516832 109 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-703P-201ENST00000516946 107 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AP000907.2-201ENST00000530827 353 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC090502.2-201ENST00000549267 280 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 CLIC4P2-201ENST00000601934 717 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL022345.1-201ENST00000607292 135 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL355802.3-201ENST00000607571 545 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 AL138713.1-201ENST00000624026 2130 ntBASIC0.52□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-582P-201ENST00000362989 107 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-26P-201ENST00000383985 107 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-1222P-201ENST00000384615 107 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RPL22P22-201ENST00000395439 379 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC006461.1-201ENST00000412637 326 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AL136133.1-201ENST00000413694 376 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC013410.2-201ENST00000422627 201 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RAC1P8-201ENST00000427086 527 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 MTND1P28-201ENST00000435623 950 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 RAD1P2-201ENST00000446414 663 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC002381.1-201ENST00000447049 280 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 CECR9-201ENST00000453421 199 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AP001025.1-201ENST00000486139 332 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC108210.2-201ENST00000503681 201 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC079140.2-201ENST00000506193 142 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 MTCYBP16-201ENST00000509187 1129 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC048346.1-201ENST00000510247 144 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 PTP4A1P4-201ENST00000512479 322 ntBASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV1-2A0A0B4J238 AC008837.2-201ENST00000513076 418 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms