Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AC087190.1-201ENST00000484462 480 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AC107032.1-201ENST00000485945 480 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 RNU4-71P-201ENST00000516258 113 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 DEFB108E-201ENST00000524692 240 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 MIR5684-201ENST00000585074 65 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 MIR376A1-201ENST00000616574 68 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AL023881.1-201ENST00000621088 301 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AC006971.1-201ENST00000407916 4486 ntBASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CAPN6Q9Y6Q1 AP001148.1-201ENST00000624124 2359 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD50.1-201ENST00000362987 71 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 snoU2_19.2-201ENST00000363024 80 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD81.1-201ENST00000363064 77 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD35B-201ENST00000363660 87 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 Y_RNA.439-201ENST00000384119 94 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MIR514A1-201ENST00000385133 98 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD58.1-201ENST00000391313 66 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL117339.3-201ENST00000418733 162 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MTCO1P39-201ENST00000426148 480 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MTND3P9-201ENST00000429526 346 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC091286.1-201ENST00000431233 461 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 RN7SKP210-201ENST00000459176 261 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 RPL23AP45-201ENST00000476406 468 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 RPL29P14-201ENST00000495837 428 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC093023.1-201ENST00000547375 507 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL442163.3-201ENST00000554110 156 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC103996.1-201ENST00000555468 102 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL360181.4-201ENST00000621752 134 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 AL450472.1-202ENST00000637286 180 ntBASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CAPN6Q9Y6Q1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 IPO8P1-201ENST00000455509 3109 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 HSPA8P1-201ENST00000425843 1833 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 RNU6-173P-201ENST00000364215 104 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD14B-201ENST00000364533 90 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 RNA5SP505-201ENST00000364748 108 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 SNORD115-46-201ENST00000390982 71 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 MIR190B-201ENST00000401119 79 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC079780.1-201ENST00000428259 207 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 MTCO3P29-201ENST00000432119 779 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 RN7SL481P-201ENST00000477764 299 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC010469.2-201ENST00000496412 480 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AK3P2-201ENST00000507976 429 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC026726.1-201ENST00000512859 601 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC022868.1-201ENST00000517767 391 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC007458.1-201ENST00000542812 373 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 MIR4458-201ENST00000578872 75 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AC008121.1-201ENST00000603244 268 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 BX284668.6-201ENST00000606899 438 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 AL355480.1-201ENST00000629041 99 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 U6.92-201ENST00000636464 89 ntBASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CAPN6Q9Y6Q1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CAPN6Q9Y6Q1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms