Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 NDUFS5P1-201ENST00000405668 289 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AL359704.1-201ENST00000411586 781 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AL353706.1-201ENST00000436728 494 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC005094.1-201ENST00000440420 368 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 MTCO1P53-201ENST00000441633 699 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AL360221.1-201ENST00000445989 335 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC087884.1-201ENST00000469738 328 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC108729.1-201ENST00000487812 947 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC096745.1-201ENST00000509945 370 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 ACA59.2-201ENST00000517061 156 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC233702.2-202ENST00000562547 291 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 AC009974.1-201ENST00000608881 455 ntBASIC1.65□□□□□ -2.15
USH1CQ9Y6N9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 RNU6-621P-201ENST00000364752 109 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 RNU6-482P-201ENST00000391068 107 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AC068050.1-201ENST00000394891 380 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AL133475.1-201ENST00000404414 305 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 OR51A5P-201ENST00000415429 942 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 MTCO1P27-201ENST00000448269 226 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 RPF2P2-201ENST00000504693 896 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AC116655.1-201ENST00000508324 901 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AC116337.1-201ENST00000509680 687 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 RNU6-548P-201ENST00000517083 115 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 RNU6-64P-201ENST00000517119 105 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AC110588.1-201ENST00000559699 137 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 MTND4LP25-201ENST00000570218 163 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AC034229.4-201ENST00000607861 441 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 AL136313.1-201ENST00000624804 202 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 LINC02211-204ENST00000642024 1070 ntBASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
USH1CQ9Y6N9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 MTND5P33-201ENST00000571250 1450 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 Y_RNA.472-201ENST00000384322 102 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC078974.1-201ENST00000411597 223 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL353621.1-201ENST00000418219 243 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 RPL7P34-201ENST00000433316 712 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 RNU1-98P-201ENST00000458992 160 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 HMGB1P35-201ENST00000503360 598 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC016550.1-201ENST00000505348 785 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 SNORA31.3-201ENST00000516029 96 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC079598.5-201ENST00000547460 117 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC025754.2-201ENST00000606491 432 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC009318.2-201ENST00000610917 651 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 MIR6134-201ENST00000617606 109 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC091953.2-201ENST00000623979 160 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AC099654.9-201ENST00000637055 678 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 CDC27P3-201ENST00000635418 1910 ntBASIC1.63□□□□□ -2.15
USH1CQ9Y6N9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AL356292.1-201ENST00000283110 373 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 RNU6-188P-201ENST00000364207 107 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 SNORA25B-201ENST00000365507 128 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 RNU6-413P-201ENST00000384115 107 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 SNORD116-12-201ENST00000384468 92 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 MIR561-201ENST00000385216 97 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 RPS25P9-201ENST00000435591 252 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 USP9YP10-201ENST00000454868 628 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 snoU109.1-201ENST00000459339 135 ntBASIC1.62□□□□□ -2.15
USH1CQ9Y6N9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms