Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 DEFB109C-201ENST00000382575 264 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 DEFB109B-201ENST00000382656 264 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-701P-201ENST00000384059 107 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-14P-201ENST00000384630 106 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AL590004.1-201ENST00000405321 300 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 MIR548K-201ENST00000408406 116 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 MIR548F5-201ENST00000408421 86 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNA5SP129-201ENST00000410276 118 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 VN1R36P-201ENST00000414936 291 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC092809.3-201ENST00000415453 231 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 MTND2P23-201ENST00000422990 651 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 CALM2P2-201ENST00000428512 440 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC108860.1-201ENST00000484521 383 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-123P-201ENST00000516163 102 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 RNU6-273P-201ENST00000516937 96 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 SNORA31.22-201ENST00000517204 135 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AP006587.4-201ENST00000526053 529 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AP000889.2-201ENST00000532684 490 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AL442663.2-201ENST00000554385 511 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC106782.4-201ENST00000568264 210 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC067852.3-201ENST00000589177 561 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 APOOP1-201ENST00000604695 592 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AC084781.2-201ENST00000615568 161 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 AL589994.2-201ENST00000621124 579 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 U6.114-201ENST00000636407 96 ntBASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGB1Q9Y5G3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.09□□□□□ -1.92
PCDHGB1Q9Y5G3 AL356274.2-201ENST00000624379 3752 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SNORA23-201ENST00000365128 182 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RNU6-629P-201ENST00000384061 103 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SNORA75.4-201ENST00000391278 119 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC110754.1-201ENST00000399740 601 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RNU4-46P-201ENST00000410818 138 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 POLHP1-201ENST00000411806 470 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RPL32P35-201ENST00000415214 394 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RAC1P6-201ENST00000423911 575 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC005019.1-201ENST00000436455 431 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC234775.1-201ENST00000454247 670 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RN7SL432P-201ENST00000484057 298 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 MTCO1P29-201ENST00000496868 288 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC093663.1-201ENST00000497190 394 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 KLHL2P1-201ENST00000508691 521 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC026801.2-201ENST00000515352 425 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RN7SKP18-201ENST00000516005 275 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RNU6-559P-201ENST00000516151 98 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 ELOCP31-201ENST00000540463 467 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 MIR3672-201ENST00000584290 82 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 XIAPP1-201ENST00000603162 600 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC092747.3-201ENST00000603769 301 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AC124303.1-201ENST00000605703 360 ntBASIC3.08□□□□□ -1.92
PCDHGB1Q9Y5G3 AL022345.1-201ENST00000607292 135 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms