Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AL109933.2-201ENST00000452651 260 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 SSXP1-201ENST00000453640 473 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC093899.1-201ENST00000457984 376 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RN7SL807P-201ENST00000470923 297 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC004263.1-201ENST00000479327 332 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC096745.1-201ENST00000509945 370 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC116353.3-201ENST00000511215 249 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC117532.1-201ENST00000514638 323 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC112198.4-201ENST00000515450 351 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-276P-201ENST00000516114 96 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RNA5SP341-201ENST00000516261 117 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RN7SKP256-201ENST00000517201 314 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC068587.4-201ENST00000533893 186 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 MIR1273C-201ENST00000578669 77 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC022893.3-201ENST00000607665 437 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC072039.2-201ENST00000608883 439 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AL365204.3-201ENST00000612448 685 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC099786.3-201ENST00000565735 1410 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC069528.2-201ENST00000624849 1991 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-1210P-201ENST00000363775 107 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 OR5H15-201ENST00000383696 930 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 Y_RNA.465-201ENST00000384293 102 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 FCF1P10-201ENST00000407590 479 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 RNU2-62P-201ENST00000410868 191 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 RPL35AP12-201ENST00000425362 338 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AL512649.1-201ENST00000428997 581 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AL139824.2-201ENST00000458731 1095 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-914P-201ENST00000516749 109 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AC010376.1-201ENST00000522101 334 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AL121895.2-201ENST00000619558 447 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AC093648.1-201ENST00000623546 606 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AC092104.1-201ENST00000497346 1441 ntBASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHTOPQ9Y3Y2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 CBX3P1-201ENST00000325243 554 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 U8.3-201ENST00000363321 132 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 Y_RNA.534-201ENST00000384599 112 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 MIR128-1-201ENST00000384921 82 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 MIR27B-201ENST00000385129 97 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AL591416.1-201ENST00000404015 867 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 RNU2-48P-201ENST00000410694 191 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC019070.1-201ENST00000415008 1024 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC016831.2-201ENST00000417179 352 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 TIMM9P1-201ENST00000436122 256 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 HIGD1AP2-201ENST00000446367 280 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 RPL21P99-201ENST00000480369 423 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC026436.1-201ENST00000510537 270 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 SNORA70.24-201ENST00000517233 118 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AP004607.1-201ENST00000524456 203 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 MIR5195-201ENST00000583555 115 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC010928.2-201ENST00000588017 287 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 CLIC4P2-201ENST00000601934 717 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 KC877982.1-201ENST00000602313 470 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC012360.2-201ENST00000609349 391 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 Z82243.1-201ENST00000609432 473 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 MIR8057-201ENST00000620957 69 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AL160394.1-201ENST00000624765 724 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 FARSBP1-201ENST00000435808 1778 ntBASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-190P-201ENST00000384154 102 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 SNORA48.2-201ENST00000390926 124 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AL136310.1-201ENST00000404926 654 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 NANOGP5-201ENST00000424456 877 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AP000949.1-201ENST00000438328 629 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 PTENP1-201ENST00000447117 1215 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC104090.1-201ENST00000506341 1171 ntBASIC1.6□□□□□ -2.15
CHTOPQ9Y3Y2 AC096571.1-202ENST00000506634 735 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms