Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 SNORA32.2-201ENST00000384049 122 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.460-201ENST00000384255 102 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 MIR493-201ENST00000385254 89 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 AL591034.1-201ENST00000407447 340 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 U3.42-201ENST00000408746 214 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 HMGN2P26-201ENST00000463169 339 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 RPS4XP22-201ENST00000480755 780 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 AL160314.1-201ENST00000490836 438 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 HMGN1P13-201ENST00000505795 138 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 AC107934.2-201ENST00000518653 310 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 BTF3P12-201ENST00000519620 469 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 HPRT1P3-201ENST00000539521 576 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 AL050343.2-201ENST00000607338 280 ntBASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.7□□□□□ -1.82
SCAF8Q9UPN6 FAM35BP-202ENST00000497389 3337 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 MTND4P35-201ENST00000604257 1375 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 RNU6-179P-201ENST00000363350 107 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 SMIM11P1-201ENST00000369586 178 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 SNORA1.3-201ENST00000384676 136 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC009161.1-201ENST00000417306 376 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 YPEL5P1-201ENST00000419731 367 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 OOSP1P1-201ENST00000423265 274 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 CALM2P2-201ENST00000428512 440 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC103851.1-201ENST00000506833 274 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 RNU6-677P-201ENST00000516914 101 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 RN7SKP60-201ENST00000516985 239 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 RNU6-1314P-201ENST00000517139 104 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC087241.2-201ENST00000535801 324 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 MIR4738-201ENST00000579134 87 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC243960.4-201ENST00000600532 288 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AL589994.2-201ENST00000621124 579 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 TPTEP1-208ENST00000636884 213 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
SCAF8Q9UPN6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AL136164.4-201ENST00000625013 2135 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.58-201ENST00000362807 102 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.154-201ENST00000363624 102 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNY3P1-201ENST00000365085 102 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNY3-201ENST00000365484 102 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU4-20P-201ENST00000365601 151 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU6-946P-201ENST00000383878 107 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 Y_RNA.490-201ENST00000384413 102 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 SNORD37.1-201ENST00000390968 65 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU6-510P-201ENST00000391239 108 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU2-33P-201ENST00000410344 192 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU6-193P-201ENST00000410977 107 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 Z85995.1-201ENST00000415547 335 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 MTND3P16-201ENST00000452205 344 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RPS29P15-201ENST00000458329 171 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU7-182P-201ENST00000459009 62 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RNU4-29P-201ENST00000515943 174 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 SCARNA15.1-201ENST00000516384 125 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RN7SKP219-201ENST00000516825 296 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 BNIP3P6-201ENST00000549284 499 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 TRAV28-201ENST00000557548 323 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 MIR4775-201ENST00000581168 75 ntBASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAF8Q9UPN6 MIR3162-201ENST00000581818 82 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms