Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 PCNPP3-201ENST00000393579 471 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AL591034.2-201ENST00000402839 359 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AL513475.1-201ENST00000406602 315 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 HSPE1P8-201ENST00000406997 288 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 RNU6-607P-201ENST00000411283 108 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC007098.1-201ENST00000420122 367 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC090774.1-201ENST00000435925 246 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 RPL23AP46-201ENST00000438548 490 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AL138752.1-201ENST00000452964 351 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 RNU4-71P-201ENST00000516258 113 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 SNRPGP16-201ENST00000533275 226 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC126177.3-201ENST00000551839 688 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AMZ2P1-203ENST00000565833 850 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC120057.2-201ENST00000571520 271 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 MIR5701-3-201ENST00000578890 82 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 MIR3133-201ENST00000583157 78 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 MIR5701-1-201ENST00000585138 82 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC025946.2-201ENST00000603398 234 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AL121772.2-201ENST00000614331 297 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 MIR5701-2-201ENST00000615634 82 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC127459.3-201ENST00000624328 466 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.75
MBD1Q9UIS9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
MBD1Q9UIS9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 U8.8-201ENST00000365399 135 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 AL603910.2-201ENST00000407268 136 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 RAB9AP3-201ENST00000412737 573 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 RAB9AP1-201ENST00000449393 573 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 RNU6-914P-201ENST00000516749 109 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 MIR548AC-201ENST00000585049 88 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 AC091953.5-201ENST00000622919 233 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 ZNF285B-201ENST00000561698 1767 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 ZNF299P-201ENST00000406845 1804 ntBASIC4.14□□□□□ -1.75
MBD1Q9UIS9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
MBD1Q9UIS9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 Y_RNA.54-201ENST00000362766 105 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 RNU6-708P-201ENST00000384217 107 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 MIR215-201ENST00000384858 110 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 MIR7-3-201ENST00000384898 110 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 RNU6-700P-201ENST00000391043 107 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 RNA5SP56-201ENST00000410277 118 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 CYCSP33-201ENST00000414485 327 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 ELOCP18-201ENST00000434209 337 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 PRDX3P3-201ENST00000447765 522 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 Y_RNA.703-201ENST00000516846 111 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 MIR7154-201ENST00000620673 73 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AL354798.1-201ENST00000622505 329 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 MIR4275-201ENST00000636486 87 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AL450472.1-202ENST00000637286 180 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AP000560.1-201ENST00000624150 1937 ntBASIC4.13□□□□□ -1.75
MBD1Q9UIS9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.12□□□□□ -1.75
MBD1Q9UIS9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MBD1Q9UIS9 RNU6-545P-201ENST00000362681 104 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 RNU6-1155P-201ENST00000363554 107 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 Y_RNA.200-201ENST00000364018 102 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 Y_RNA.324-201ENST00000365165 102 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AL160275.2-201ENST00000412010 394 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AL139156.1-201ENST00000412785 841 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AL691449.1-201ENST00000426570 421 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 HMGB1P27-201ENST00000431429 603 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AC006011.1-201ENST00000442758 349 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AC133134.1-201ENST00000466800 359 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 Vault.1-201ENST00000516474 102 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 DEFB108E-201ENST00000524692 240 ntBASIC4.12□□□□□ -1.75
MBD1Q9UIS9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms