Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC090617.7-201ENST00000623952 126 ntBASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC6Q9UBN7 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.88
HDAC6Q9UBN7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HDAC6Q9UBN7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
HDAC6Q9UBN7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC073325.2-201ENST00000339545 159 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AL591416.1-201ENST00000404015 867 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 RNA5SP118-201ENST00000410385 109 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 BTF3L4P3-201ENST00000418879 476 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AL139415.2-201ENST00000431968 163 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 PIGFP3-201ENST00000441918 722 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC073415.1-201ENST00000449240 153 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC233702.1-201ENST00000482905 502 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 TTC39CP1-201ENST00000512513 755 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 RN7SKP219-201ENST00000516825 296 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC092325.1-201ENST00000566449 554 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC008521.1-201ENST00000587471 187 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
HDAC6Q9UBN7 RNU6-552P-201ENST00000362869 119 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RNU6-288P-201ENST00000363690 104 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RNY3P3-201ENST00000363816 102 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RPS4XP3-201ENST00000398541 413 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RNU6-908P-201ENST00000410160 94 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 GPM6BP2-201ENST00000432046 144 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 GPM6BP1-201ENST00000446387 144 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 SNRPFP3-201ENST00000457792 225 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RNA5SP310-201ENST00000459084 116 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RPL21P41-201ENST00000459863 264 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 KC877373.1-201ENST00000479066 408 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 EIF4EP3-201ENST00000498782 656 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC083906.5-201ENST00000503722 328 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC117522.3-201ENST00000507974 584 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 RNU6-123P-201ENST00000516163 102 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 MTND1P35-201ENST00000526739 508 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AL158032.1-201ENST00000605401 106 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC008962.1-201ENST00000605729 304 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
HDAC6Q9UBN7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 MIR449A-201ENST00000362113 91 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 RNU6-1090P-201ENST00000364065 94 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 Y_RNA.381-201ENST00000365666 102 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 SNORD37.1-201ENST00000390968 65 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AL139397.2-201ENST00000404529 772 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 RNU6-373P-201ENST00000411247 98 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 USP9YP6-201ENST00000413550 854 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 RPL7P10-201ENST00000417407 739 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 ZNF863P-201ENST00000426746 417 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 MTCO3P18-201ENST00000440206 761 ntBASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.31□□□□□ -1.88
HDAC6Q9UBN7 AC104058.1-201ENST00000448028 297 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms