Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNA5SP283-201ENST00000365604 119 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 DEFB109C-201ENST00000382575 264 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 DEFB109B-201ENST00000382656 264 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 TBCAP1-201ENST00000436520 327 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 GSTA11P-201ENST00000452866 669 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1037P-201ENST00000459571 107 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC068781.1-201ENST00000488231 618 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.721-201ENST00000517207 102 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 TRAV28-201ENST00000557548 323 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC004817.2-201ENST00000561794 651 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC010205.1-201ENST00000616668 449 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 AC087588.2-201ENST00000617667 426 ntBASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
PPARGC1AQ9UBK2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PPARGC1AQ9UBK2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-1059P-201ENST00000363752 98 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AL627311.1-201ENST00000431514 115 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AL160004.2-201ENST00000432935 350 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 RPL23AP50-201ENST00000434149 455 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 FTH1P25-201ENST00000447665 469 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 RPL12P25-201ENST00000455592 494 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 ACA59.1-201ENST00000515966 143 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 RNA5SP179-201ENST00000517284 121 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 SYF2P1-201ENST00000550658 413 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC005592.1-201ENST00000566527 1640 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 CPDP1-201ENST00000579660 283 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AC018889.1-201ENST00000605372 397 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 AL162373.1-201ENST00000620433 407 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 MIR6500-201ENST00000622700 86 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 Z69720.2-201ENST00000624755 279 ntBASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPARGC1AQ9UBK2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 SNORD14B-201ENST00000364533 90 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RNA5SP515-201ENST00000364570 118 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-384P-201ENST00000364900 104 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.401-201ENST00000383965 117 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.452-201ENST00000384202 108 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-933P-201ENST00000384424 107 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-790P-201ENST00000384479 105 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 MIR1302-3-201ENST00000408128 138 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RNU6-628P-201ENST00000410675 107 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 Y_RNA.623-201ENST00000411128 95 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC096664.2-201ENST00000411843 406 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AL592148.1-201ENST00000413568 445 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC093151.1-201ENST00000427711 313 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 RPS15AP10-201ENST00000432472 382 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 HMGB1P37-201ENST00000439613 609 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC113155.1-201ENST00000511141 769 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 TRAV32-201ENST00000553993 340 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AL138825.1-201ENST00000618587 192 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AL731566.2-201ENST00000618971 317 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AC138305.3-201ENST00000624988 240 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 AP001148.1-201ENST00000624124 2359 ntBASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.07□□□□□ -1.76
PPARGC1AQ9UBK2 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PPARGC1AQ9UBK2 RNA5SP295-201ENST00000362655 121 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms