Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AP004607.1-201ENST00000524456 203 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 AC092574.1-201ENST00000609771 420 ntBASIC1.28□□□□□ -2.2
CCDC88CQ9P219 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC88CQ9P219 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 RNU6-575P-201ENST00000411326 105 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 CYCSP48-201ENST00000417124 323 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 MTCO1P53-201ENST00000441633 699 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 MTCO1P42-201ENST00000457379 726 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 snoU109.3-201ENST00000459477 145 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC132942.1-201ENST00000486753 483 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 RNY4P37-201ENST00000516225 96 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 NRON-201ENST00000517270 370 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC090079.2-201ENST00000575289 768 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL391813.1-201ENST00000603098 260 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC004805.2-201ENST00000605382 482 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL158211.2-201ENST00000607282 395 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC009237.15-201ENST00000610252 501 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 RNU1-72P-201ENST00000362976 153 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL079342.2-201ENST00000403367 482 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 MIR1276-201ENST00000408707 83 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 MTCO3P45-201ENST00000443036 613 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 RPS29P23-201ENST00000458635 123 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC080013.2-201ENST00000460866 323 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC027575.1-201ENST00000481064 460 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 HMGN1P7-201ENST00000491722 313 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC008507.2-201ENST00000588402 1176 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AC239868.4-201ENST00000608318 671 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
CCDC88CQ9P219 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC88CQ9P219 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 RPS3AP37-201ENST00000419176 745 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AL953862.1-201ENST00000423016 168 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC019178.2-201ENST00000423595 505 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 RPL7P34-201ENST00000433316 712 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 RNA5SP112-201ENST00000515937 99 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC021451.1-201ENST00000523498 1129 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AL132857.1-201ENST00000555180 708 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AL132657.2-201ENST00000564417 358 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 MTND3P13-201ENST00000574391 343 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC005951.2-201ENST00000576282 495 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC112220.2-201ENST00000605513 533 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 PCMTD1P7-201ENST00000634506 357 ntBASIC1.26□□□□□ -2.21
CCDC88CQ9P219 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
CCDC88CQ9P219 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MTATP6P19-201ENST00000413797 659 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 RPL26P27-201ENST00000414397 437 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 SNRPEP7-201ENST00000438350 220 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AL357134.1-201ENST00000445848 426 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 ELOCP30-201ENST00000447108 299 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 KATNBL1P6-201ENST00000453433 915 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 DYNLL1P5-201ENST00000467158 270 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC008837.2-201ENST00000513076 418 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 RNU6-1225P-201ENST00000516336 65 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AP005597.4-201ENST00000526762 229 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 CYCSP2-201ENST00000558168 301 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC092953.2-201ENST00000608000 699 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 U4atac.1-201ENST00000618345 95 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC123767.1-202ENST00000620407 817 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
CCDC88CQ9P219 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC88CQ9P219 AC008555.8-201ENST00000623602 2168 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms