Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
HCN3Q9P1Z3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNU6-898P-201ENST00000365627 104 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNU6-877P-201ENST00000383868 107 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNU6-434P-201ENST00000384376 107 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNU6-908P-201ENST00000410160 94 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AL669831.1-202ENST00000428504 417 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AL121601.2-201ENST00000438019 707 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 GTF2IP13-201ENST00000438487 386 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 Z75741.1-201ENST00000446793 314 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RPS15AP27-201ENST00000449183 343 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 BTF3P15-201ENST00000455606 336 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RN7SL807P-201ENST00000470923 297 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 MTAPP1-201ENST00000489154 819 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RPS27P26-201ENST00000494583 239 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC074344.1-201ENST00000512823 224 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 SNORA64.4-201ENST00000516632 81 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 IGHV3-76-201ENST00000522465 295 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC00933-203ENST00000559812 219 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 CYCSP39-201ENST00000565821 309 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC010653.1-201ENST00000571108 881 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC073657.2-201ENST00000605661 303 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 DISC2.1-201ENST00000612827 205 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 AC110079.1-202ENST00000635213 138 ntBASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HCN3Q9P1Z3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
HCN3Q9P1Z3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 SNORA38.1-201ENST00000364172 131 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 RNA5SP139-201ENST00000364340 117 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 MIR10A-201ENST00000385043 110 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 SNORA16.2-201ENST00000390991 127 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC023141.4-201ENST00000412031 328 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 PGBD4P6-201ENST00000421501 610 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 TOMM20P4-201ENST00000427861 435 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 PRPS1P1-201ENST00000445305 876 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 MTND3P16-201ENST00000452205 344 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC022634.1-201ENST00000520765 532 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 MIR5680-201ENST00000577577 84 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 AP003400.5-201ENST00000624827 617 ntBASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HCN3Q9P1Z3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 MIR148B-201ENST00000362252 99 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 SAR1AP2-201ENST00000392696 594 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 RNU6-193P-201ENST00000410977 107 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL592148.1-201ENST00000413568 445 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL365496.1-201ENST00000426885 215 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL627311.1-201ENST00000431514 115 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
HCN3Q9P1Z3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms