Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CXXC1Q9P0U4 LINC02555-201ENST00000563933 1951 ntBASIC4.8□□□□□ -1.64
CXXC1Q9P0U4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
CXXC1Q9P0U4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
CXXC1Q9P0U4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 Y_RNA.20-201ENST00000362479 113 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 RNU6-778P-201ENST00000363269 103 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 MIR634-201ENST00000385208 97 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 SNORD78.2-201ENST00000391076 69 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AC009296.1-201ENST00000443146 155 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AC079587.1-201ENST00000603846 277 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AP001282.2-201ENST00000616149 309 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 AC024581.2-201ENST00000619986 252 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 ADAM5-202ENST00000399789 1942 ntBASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.79□□□□□ -1.64
CXXC1Q9P0U4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AC007390.2-201ENST00000606229 3803 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AL022322.2-201ENST00000624072 20397 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 SNORD81.1-201ENST00000363064 77 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 SNORD27-201ENST00000363981 72 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 MIR518D-201ENST00000385014 87 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 SNORD115-46-201ENST00000390982 71 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 RPL21P65-201ENST00000406094 466 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 MIR548I3-201ENST00000408378 149 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 MIR548I1-201ENST00000408810 149 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AP000907.1-201ENST00000428428 510 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 Z82188.1-201ENST00000436709 154 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AL645939.1-201ENST00000453429 797 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 RPL23AP14-201ENST00000468281 468 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 S100A11P1-201ENST00000477525 312 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AC022868.1-201ENST00000517767 391 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 MRPS36P4-201ENST00000534436 298 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 RMST_6.1-201ENST00000611980 203 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AC091903.1-201ENST00000624322 454 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AC012442.3-202ENST00000636742 206 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
CXXC1Q9P0U4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CXXC1Q9P0U4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 Y_RNA.111-201ENST00000363248 100 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 RNU6-1286P-201ENST00000383871 107 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 MIR491-201ENST00000384877 84 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 MIR888-201ENST00000401186 77 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC093578.1-201ENST00000415219 368 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AL445584.1-201ENST00000431451 330 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC098831.1-201ENST00000440661 216 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC012671.1-201ENST00000451912 203 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 RPL23AP75-201ENST00000491601 451 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 RNU6-111P-201ENST00000517179 105 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 MIR4300-201ENST00000581016 96 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC020895.1-201ENST00000595362 272 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 SNORA51-201ENST00000606420 132 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AC084757.4-201ENST00000616350 526 ntBASIC4.77□□□□□ -1.65
CXXC1Q9P0U4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms