Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC024909.2-201ENST00000553035 286 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 MIR1273C-201ENST00000578669 77 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC024619.4-201ENST00000580924 316 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AL139286.2-201ENST00000606838 396 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC064807.4-201ENST00000607201 407 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 MIR15A-201ENST00000607334 83 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 RN7SKP226-201ENST00000364912 300 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 RNU6-282P-201ENST00000365357 103 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 RNU6-658P-201ENST00000384606 106 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL513475.1-201ENST00000406602 315 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 RNU2-49P-201ENST00000410666 184 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL096701.2-201ENST00000416920 238 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL358934.1-201ENST00000432346 324 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC079448.1-201ENST00000449377 373 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 TRBV1-201ENST00000476502 284 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 MRPS36P2-201ENST00000512569 299 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 RNU6-410P-201ENST00000517006 107 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 GLYCAM1-201ENST00000546596 285 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL157871.3-201ENST00000557231 293 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AL022154.1-201ENST00000604698 785 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC012409.4-201ENST00000612923 249 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AC092608.2-201ENST00000624427 218 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 MIR3199-2-201ENST00000636243 86 ntBASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC4Q9NTJ3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 SNORA68.1-201ENST00000364537 132 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 RNU6-108P-201ENST00000365558 107 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 OR5H15-201ENST00000383696 930 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 RNU6-641P-201ENST00000384006 107 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 MIR196B-201ENST00000384852 84 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 RNU6-387P-201ENST00000411331 105 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC114491.1-201ENST00000416095 246 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 OSTCP8-201ENST00000445117 448 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 Z96811.1-201ENST00000445880 108 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC107626.1-201ENST00000471084 183 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC126389.1-201ENST00000477436 290 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AIG1P1-201ENST00000503376 148 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC098591.2-201ENST00000510152 315 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC108078.2-201ENST00000510750 236 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 RNU6-430P-201ENST00000517078 107 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC021739.1-201ENST00000559631 174 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AGGF1P4-201ENST00000568249 801 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 MTCYBP33-201ENST00000575007 1130 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 Z99129.1-201ENST00000612510 255 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AL589743.7-201ENST00000612637 233 ntBASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC4Q9NTJ3 AC010889.1-201ENST00000566193 2666 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 SNORA4.3-201ENST00000365564 137 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 RNU6-395P-201ENST00000365662 106 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 SNORA24.1-201ENST00000384401 135 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 USP9YP6-201ENST00000413550 854 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 PIGFP2-201ENST00000421400 651 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 GPR143P-201ENST00000434155 205 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 DPPA3P1-201ENST00000448050 469 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 MTND3P5-201ENST00000512798 333 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.25□□□□□ -1.89
SMC4Q9NTJ3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms