Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.35□□□□□ -2.19
CISHQ9NSE2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CISHQ9NSE2 RNA5SP432-201ENST00000362480 116 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU6-1167P-201ENST00000363227 94 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU6-432P-201ENST00000384196 109 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU6-952P-201ENST00000391164 108 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNA5SP212-201ENST00000391223 107 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 MIR1302-8-201ENST00000408342 128 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU2-42P-201ENST00000410697 113 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 USP9YP6-201ENST00000413550 854 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 AL592045.1-201ENST00000429867 352 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 RPL17P35-201ENST00000432217 549 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 AL161788.1-201ENST00000441805 169 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 AC008628.1-201ENST00000508663 265 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 SUB1P3-201ENST00000564581 315 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 AL109620.1-201ENST00000618738 1197 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
CISHQ9NSE2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.34□□□□□ -2.19
CISHQ9NSE2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CISHQ9NSE2 AP000560.1-201ENST00000624150 1937 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CISHQ9NSE2 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 U8.3-201ENST00000363321 132 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL033519.2-201ENST00000403958 392 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 PTGES3P2-201ENST00000407942 482 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL160275.3-201ENST00000423876 471 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 RSU1P2-202ENST00000437884 485 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL603825.1-201ENST00000438481 80 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 FABP5P15-201ENST00000453566 214 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC104563.1-201ENST00000476147 376 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 RPL36AP48-201ENST00000485521 314 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC018868.1-201ENST00000491307 315 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 RNU6-1225P-201ENST00000516336 65 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 AC104417.1-201ENST00000523974 751 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CISHQ9NSE2 MIR5708-201ENST00000579723 85 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL445435.1-201ENST00000604232 665 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 AL161798.1-201ENST00000604630 131 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.33□□□□□ -2.2
CISHQ9NSE2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
CISHQ9NSE2 SNORA25B-201ENST00000365507 128 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 RNU6-658P-201ENST00000384606 106 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 MIR561-201ENST00000385216 97 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 UBE2FP1-201ENST00000416536 447 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 BTF3L4P3-201ENST00000418879 476 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 RPL18AP17-201ENST00000455326 198 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC140059.1-201ENST00000489238 361 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC104685.1-201ENST00000502445 371 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC034114.1-201ENST00000520293 285 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 DUXAP5-201ENST00000529668 529 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC079598.5-201ENST00000547460 117 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 SNRPGP1-201ENST00000553864 222 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC026271.5-201ENST00000577873 130 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.32□□□□□ -2.2
CISHQ9NSE2 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AC092447.10-201ENST00000620607 1652 ntBASIC1.32□□□□□ -2.2
CISHQ9NSE2 AL589826.1-201ENST00000340697 249 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 CISD1P1-201ENST00000393907 327 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC127391.1-201ENST00000411737 98 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 ISCA1P1-201ENST00000426679 387 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 Z82205.1-201ENST00000428456 297 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC244035.1-201ENST00000430042 390 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.31□□□□□ -2.2
CISHQ9NSE2 GPM6BP2-201ENST00000432046 144 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 GTF2IP3-201ENST00000433887 494 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.31□□□□□ -2.2
CISHQ9NSE2 GPM6BP1-201ENST00000446387 144 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 RPL36AP21-201ENST00000490372 323 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC021146.2-201ENST00000504736 556 ntBASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.31□□□□□ -2.2
CISHQ9NSE2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.31□□□□□ -2.2
CISHQ9NSE2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms