Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 MTND4LP10-201ENST00000435146 291 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 GTF2IP12-201ENST00000456547 356 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AF213884.2-201ENST00000510417 903 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC093510.2-201ENST00000562820 896 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC074051.3-201ENST00000570238 358 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 MIR4713-201ENST00000582691 75 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC016925.2-201ENST00000605108 242 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 Z69720.2-201ENST00000624755 279 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AP003400.5-201ENST00000624827 617 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 OR5H6-203ENST00000642105 978 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 RNU6-1164P-201ENST00000364428 107 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC023141.4-201ENST00000412031 328 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC241584.1-201ENST00000438469 1241 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC092393.1-201ENST00000439625 742 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 MTND6P13-201ENST00000443510 523 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 DDX3P2-201ENST00000446138 111 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 SNORA44.1-201ENST00000517031 108 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC107953.1-201ENST00000522216 297 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC069294.1-201ENST00000608397 350 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AL590410.1-201ENST00000617925 333 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 U4atac.1-201ENST00000618345 95 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 AC008443.7-201ENST00000622195 246 ntBASIC0.69□□□□□ -2.3
TULP4Q9NRJ4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 RNU6-1155P-201ENST00000363554 107 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 SNORA8-201ENST00000384574 139 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 VN1R42P-201ENST00000424651 344 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 RPS20P24-201ENST00000457473 361 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 AC008379.1-201ENST00000463655 464 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 RNU6-362P-201ENST00000516736 90 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 AP003497.1-201ENST00000528472 562 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 MIR3921-201ENST00000577308 85 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 MIR3198-2-201ENST00000577868 80 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 AC092192.1-201ENST00000633154 1018 ntBASIC0.68□□□□□ -2.3
TULP4Q9NRJ4 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 Y_RNA.549-201ENST00000384657 102 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 MIR329-2-201ENST00000385029 84 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 MIR325-201ENST00000385260 98 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 MIR1290-201ENST00000408735 78 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AL592447.1-201ENST00000447592 540 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 RNU6-1095P-201ENST00000516148 108 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 RNA5SP137-201ENST00000516833 135 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC025857.1-201ENST00000525252 377 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AC023158.1-201ENST00000561632 1025 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AL078605.1-201ENST00000603529 500 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.67□□□□□ -2.3
TULP4Q9NRJ4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 SNORA63.3-201ENST00000362682 132 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 RNU4-67P-201ENST00000364569 141 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 RNU6-1083P-201ENST00000384022 107 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 RNA5SP25-201ENST00000410815 110 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 MRPS17P3-201ENST00000465453 385 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 HMGB1P51-201ENST00000605166 638 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AP000654.2-201ENST00000605633 586 ntBASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TULP4Q9NRJ4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 SNORA40.19-201ENST00000390846 128 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 RPL7P29-201ENST00000437151 728 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 RNA5SP57-201ENST00000459463 123 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 HMGB1P36-201ENST00000487709 576 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 HAUS1P3-201ENST00000523909 662 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 HMGN2P15-201ENST00000585707 270 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 AC110792.4-201ENST00000609843 298 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 AC006213.5-201ENST00000619673 288 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 AC040168.1-201ENST00000623594 991 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 AC091925.2-201ENST00000625059 256 ntBASIC0.65□□□□□ -2.31
TULP4Q9NRJ4 RNU6-272P-201ENST00000411028 104 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms