Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FABP5P5-201ENST00000515537 406 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 Y_RNA.688-201ENST00000516565 95 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 AP003467.2-201ENST00000520175 319 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 AC060788.1-201ENST00000521318 469 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 AC009127.3-201ENST00000570531 403 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 RPS15AP11-201ENST00000594193 385 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 AC110760.3-201ENST00000598794 467 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 MIR3199-2-201ENST00000636243 86 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 Z99571.1-201ENST00000636677 394 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 MIR7515-201ENST00000637837 67 ntBASIC2.53□□□□□ -2
HPS4Q9NQG7 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 HSPE1P11-201ENST00000339579 310 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 SNORD56.2-201ENST00000363242 71 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 MT-TH-201ENST00000387441 69 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 SNORA26.8-201ENST00000391306 124 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 MIR1302-8-201ENST00000408342 128 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 Y_RNA.598-201ENST00000410480 95 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AF274854.1-201ENST00000413236 615 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC096649.2-201ENST00000416186 393 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC007283.2-201ENST00000424739 197 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 MTCO3P30-201ENST00000426425 670 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC137499.1-201ENST00000427602 88 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 MTND2P4-201ENST00000445034 1004 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 TAF9P1-201ENST00000445421 515 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 TAF9P2-201ENST00000454958 515 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 snoU13.26-201ENST00000459452 105 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 MTCO2P29-201ENST00000465212 189 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 RNU7-51P-201ENST00000516560 62 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AL356057.1-201ENST00000533798 831 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 RPL21P5-201ENST00000554662 472 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC021739.1-201ENST00000559631 174 ntBASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPS4Q9NQG7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 MTND4P35-201ENST00000604257 1375 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 RNA5SP425-201ENST00000410336 112 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AL591212.2-201ENST00000433923 257 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 IPO7P1-201ENST00000442031 636 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC093899.1-201ENST00000457984 376 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 TRBV1-201ENST00000476502 284 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC026801.1-201ENST00000497178 464 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 RPS27P27-201ENST00000498779 255 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 RNU6-677P-201ENST00000516914 101 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC084851.1-201ENST00000529105 249 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC009063.1-201ENST00000563342 702 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 MYL12BP1-201ENST00000569826 507 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC007151.1-201ENST00000572774 483 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC009977.1-201ENST00000586015 570 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC005261.5-201ENST00000596280 355 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC174048.1-201ENST00000603389 144 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC103810.6-201ENST00000606708 136 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AP002360.4-201ENST00000606980 481 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC046143.2-201ENST00000609789 160 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC004908.3-201ENST00000610248 625 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC011939.3-201ENST00000613686 466 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AC130324.3-201ENST00000614165 542 ntBASIC2.51□□□□□ -2.01
HPS4Q9NQG7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
HPS4Q9NQG7 ADAM3A-203ENST00000461344 2157 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 RNU5E-1-201ENST00000362477 120 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 RNU4-21P-201ENST00000362802 126 ntBASIC2.5□□□□□ -2.01
HPS4Q9NQG7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.5□□□□□ -2.01
HPS4Q9NQG7 Y_RNA.534-201ENST00000384599 112 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms