Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SEMA4BQ9NPR2 AC103710.2-202ENST00000641454 2853 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC121333.1-201ENST00000567488 2709 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.132-201ENST00000363421 102 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 SNORD113-7-201ENST00000363762 77 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-82P-201ENST00000363970 107 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-512P-201ENST00000364438 103 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.259-201ENST00000364619 101 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-217P-201ENST00000384164 104 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-140P-201ENST00000384566 108 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU4-14P-201ENST00000410858 122 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC008264.1-201ENST00000447612 367 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RPS15AP34-201ENST00000487776 387 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 MTCO1P29-201ENST00000496868 288 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-559P-201ENST00000516151 98 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.689-201ENST00000516589 107 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNA5SP471-201ENST00000516971 106 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC090136.1-201ENST00000520009 240 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AP000889.2-201ENST00000532684 490 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC008739.3-201ENST00000603262 127 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC136601.2-201ENST00000604356 474 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 APOOP1-201ENST00000604695 592 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC022893.3-201ENST00000607665 437 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 PART1_1.1-201ENST00000611761 217 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SEMA4BQ9NPR2 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.162-201ENST00000363683 102 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.339-201ENST00000365325 102 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 MIR301A-201ENST00000385261 86 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 Y_RNA.579-201ENST00000390939 94 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 MIR548F5-201ENST00000408421 86 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RNA5SP111-201ENST00000411386 101 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC092809.3-201ENST00000415453 231 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL353729.1-201ENST00000425044 720 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RPS3AP52-201ENST00000435639 297 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC005019.1-201ENST00000436455 431 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 NDUFA5P4-201ENST00000436704 385 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC091153.1-201ENST00000466297 402 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 HMGN2P13-201ENST00000476476 274 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RPL7P43-201ENST00000478876 753 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 SNORA25.17-201ENST00000517184 124 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-711P-201ENST00000517255 106 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 IGKV2-23-201ENST00000518729 323 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC093249.1-201ENST00000567049 203 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL138889.2-201ENST00000603883 242 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL670379.10-201ENST00000604330 253 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL670379.9-201ENST00000605428 253 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC069200.1-201ENST00000609511 323 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL359757.2-201ENST00000624309 274 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 MTND4LP32-201ENST00000636111 270 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
SEMA4BQ9NPR2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 RNA5SP197-201ENST00000363357 119 ntBASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 RNU6-692P-201ENST00000384496 107 ntBASIC3.31□□□□□ -1.88
SEMA4BQ9NPR2 RNA5SP219-201ENST00000390940 113 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms