Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MTCYBP35-201ENST00000503630 1137 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC006518.2-201ENST00000542513 940 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 MIR4789-201ENST00000577469 82 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC009974.1-201ENST00000608881 455 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
TRIM4Q9C037 MIR5739-201ENST00000619803 80 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 LINC02211-204ENST00000642024 1070 ntBASIC1.45□□□□□ -2.18
TRIM4Q9C037 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM4Q9C037 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 SNRPEP3-201ENST00000338402 276 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 RNU6-28P-201ENST00000362378 107 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 RNU6-792P-201ENST00000363490 107 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 RNU6-650P-201ENST00000365658 111 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 RNU6-637P-201ENST00000384050 107 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 SNORA8-201ENST00000384574 139 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 TPMTP3-201ENST00000411928 735 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 RPL26P27-201ENST00000414397 437 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 BTF3P8-201ENST00000414577 526 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC092902.1-201ENST00000486999 259 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 SNORA25.11-201ENST00000515935 105 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 AP005597.4-201ENST00000526762 229 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 ROCK1P1-201ENST00000573767 549 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 MTCYBP22-201ENST00000603788 447 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 PRR13P7-201ENST00000605538 430 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.44□□□□□ -2.18
TRIM4Q9C037 AC010133.1-201ENST00000615809 842 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 Z99571.1-201ENST00000636677 394 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 MIR1322-201ENST00000638013 71 ntBASIC1.44□□□□□ -2.18
TRIM4Q9C037 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRIM4Q9C037 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRIM4Q9C037 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 RNU4-13P-201ENST00000364019 141 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC007098.1-201ENST00000420122 367 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AL160275.3-201ENST00000423876 471 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 ELOCP14-201ENST00000428070 331 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 ZFAND6P1-201ENST00000434138 605 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 ELOCP7-201ENST00000439968 331 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 CECR9-201ENST00000453421 199 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC021146.8-201ENST00000507455 733 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC010468.3-201ENST00000508225 458 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 RNU6-1102P-201ENST00000516149 96 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 RNU6-1261P-201ENST00000517194 104 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 AL731537.2-201ENST00000561565 951 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 AC138915.2-201ENST00000569776 97 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 ZNF92P2-201ENST00000600543 1059 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TRIM4Q9C037 Z75746.1-201ENST00000440243 2080 ntBASIC1.43□□□□□ -2.18
TRIM4Q9C037 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRIM4Q9C037 MIR16-2-201ENST00000362117 81 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 Y_RNA.25-201ENST00000362528 102 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 Y_RNA.234-201ENST00000364409 97 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 RNU6-1078P-201ENST00000364522 103 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 RNA5SP240-201ENST00000365355 128 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 MTCO2P5-201ENST00000422621 426 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC010153.1-201ENST00000432862 727 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 USP9YP22-201ENST00000438971 294 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC093752.1-206ENST00000511823 336 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC023632.1-201ENST00000518463 375 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 DUXAP1-201ENST00000556632 463 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AC090079.2-201ENST00000575289 768 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.42□□□□□ -2.18
TRIM4Q9C037 AL139344.1-201ENST00000605228 195 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 AL109620.1-201ENST00000618738 1197 ntBASIC1.42□□□□□ -2.18
TRIM4Q9C037 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 Y_RNA.245-201ENST00000364493 95 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AC027644.1-201ENST00000419595 298 ntBASIC1.41□□□□□ -2.18
TRIM4Q9C037 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.41□□□□□ -2.18
TRIM4Q9C037 NANOGP2-201ENST00000435391 727 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms