Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM54Q9BYV2 AL136164.4-201ENST00000625013 2135 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AC138393.1-203ENST00000327086 343 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RNU6-562P-201ENST00000362731 107 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RNA5SP515-201ENST00000364570 118 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RNU6-384P-201ENST00000364900 104 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 SNORD116-11-201ENST00000383882 92 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 MIR591-201ENST00000385290 95 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RPL5P18-201ENST00000406671 891 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RPL26P9-201ENST00000457466 433 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 SNORD105B-201ENST00000458770 79 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AC026801.1-201ENST00000497178 464 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AC008526.1-201ENST00000509149 338 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RN7SKP18-201ENST00000516005 275 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RNU6-703P-201ENST00000516946 107 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 RNA5SP454-201ENST00000517231 127 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 COPS8P3-201ENST00000526024 482 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 AC007151.1-201ENST00000572774 483 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 MIR4795-201ENST00000584182 89 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 APOOP1-201ENST00000604695 592 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 U2.21-201ENST00000637295 81 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 SRP72P2-201ENST00000344851 1979 ntBASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM54Q9BYV2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 MTND5P7-201ENST00000413558 1798 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RNU6-778P-201ENST00000363269 103 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RNU6-270P-201ENST00000364131 105 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RNU1-64P-201ENST00000365443 163 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 Y_RNA.384-201ENST00000383909 102 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 MIR548F5-201ENST00000408421 86 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RNU6-55P-201ENST00000411092 107 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RNU6-954P-201ENST00000411355 107 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AC074085.1-201ENST00000413598 418 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AL035423.1-201ENST00000420331 213 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 PGBD4P6-201ENST00000421501 610 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RPL32P28-201ENST00000443577 397 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 RPL23AP14-201ENST00000468281 468 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AP006245.1-201ENST00000522549 120 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AC026371.1-201ENST00000551867 419 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AL355375.2-201ENST00000574825 175 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 MIR7851-201ENST00000610611 160 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AL138880.2-201ENST00000616214 239 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
TRIM54Q9BYV2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 Y_RNA.135-201ENST00000363439 95 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 RNA5SP51-201ENST00000364750 119 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AL359837.1-201ENST00000381357 287 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 RN7SKP202-201ENST00000410439 330 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 Y_RNA.635-201ENST00000459041 101 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 snoU13.28-201ENST00000459235 104 ntBASIC3.48□□□□□ -1.85
TRIM54Q9BYV2 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms