Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC007938.3-201ENST00000604965 623 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 RNU6-87P-201ENST00000607561 108 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AL451064.1-201ENST00000607718 471 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AL589743.7-201ENST00000612637 233 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AC013476.2-201ENST00000614456 459 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AC098679.4-201ENST00000624241 654 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AC022336.2-201ENST00000568966 2538 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 AL137003.2-201ENST00000606924 2538 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 ZNF72P-201ENST00000425869 1908 ntBASIC1.99□□□□□ -2.09
RSPO3Q9BXY4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RNU5E-1-201ENST00000362477 120 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RNU6-198P-201ENST00000384258 104 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 Y_RNA.517-201ENST00000384551 106 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RNA5SP354-201ENST00000391247 136 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 FCF1P10-201ENST00000407590 479 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RNU2-16P-201ENST00000410712 136 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 BX295541.1-201ENST00000417774 250 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 USP9YP27-201ENST00000418455 438 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 PPP1R11P2-201ENST00000423543 382 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC104651.1-201ENST00000427559 735 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 ISCA1P6-201ENST00000427740 390 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC010975.2-201ENST00000427781 588 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 MTCO3P5-201ENST00000433620 714 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 USP9YP8-201ENST00000441913 500 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL031659.1-201ENST00000447075 539 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL139109.1-201ENST00000455491 297 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC109464.2-201ENST00000510242 943 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 RNU6-405P-201ENST00000516637 110 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 SNORA18.6-201ENST00000516792 115 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AP002453.2-201ENST00000533503 320 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL133153.1-201ENST00000557756 303 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 MIR1273D-201ENST00000577266 86 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 MIR3117-201ENST00000584034 78 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC068790.3-201ENST00000602988 553 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL161729.4-201ENST00000604650 476 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC104073.3-201ENST00000610942 955 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 HULC.1-201ENST00000612720 240 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AC005332.10-201ENST00000612725 619 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AP001506.1-201ENST00000615444 211 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 HMGB1P24-202ENST00000615653 685 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL603758.1-201ENST00000618654 241 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 UCA1.1-201ENST00000620952 75 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 AL136313.1-201ENST00000624804 202 ntBASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RSPO3Q9BXY4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU1-105P-201ENST00000363470 161 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 SNORA68.1-201ENST00000364537 132 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU6-637P-201ENST00000384050 107 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU6-754P-201ENST00000391166 107 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL136372.1-201ENST00000403060 228 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 BTF3P7-201ENST00000407097 488 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU2-43P-201ENST00000410306 190 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU6-516P-201ENST00000411381 104 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 HMGB3P2-201ENST00000411913 584 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 MTCO1P21-201ENST00000416634 589 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 SPA17P1-201ENST00000416656 452 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 BX276092.3-201ENST00000424182 230 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC024082.2-201ENST00000434771 238 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC004866.2-201ENST00000438285 481 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 IPO7P1-201ENST00000442031 636 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL353705.4-201ENST00000449661 238 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU7-26P-201ENST00000458980 63 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 KLF3P2-201ENST00000465138 268 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RPS15AP36-201ENST00000492022 382 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms