Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RPL23AP65-201ENST00000475608 468 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC109925.1-201ENST00000478069 331 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 RNA5SP446-201ENST00000515955 82 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC008694.2-201ENST00000517591 306 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 AP001485.1-201ENST00000604799 199 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 ARF4P1-201ENST00000605447 541 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 MIR6891-201ENST00000618788 93 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
SSBP3Q9BWW4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC022893.2-201ENST00000564832 3296 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC018529.3-201ENST00000624212 2254 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU4-90P-201ENST00000362773 141 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU6-704P-201ENST00000364162 103 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU6-290P-201ENST00000365212 101 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC068538.1-201ENST00000376856 336 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNY1P5-201ENST00000383890 115 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 SNORA36C-201ENST00000384289 132 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 SNORD78.2-201ENST00000391076 69 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 SNORA53-201ENST00000391141 249 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AL079342.1-201ENST00000401460 267 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC079354.2-201ENST00000453523 154 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 COX6CP14-201ENST00000469580 174 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC010618.1-201ENST00000469924 477 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 UQCRHP4-201ENST00000471686 272 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AK3P2-201ENST00000507976 429 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 PARP4P3-201ENST00000510265 317 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 VWA8P1-201ENST00000510889 176 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC108043.1-201ENST00000512696 574 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RNU6-612P-201ENST00000516909 102 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC103996.1-201ENST00000555468 102 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 MIR3939-201ENST00000582614 106 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 RPL23AP78-201ENST00000599928 470 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC072026.1-201ENST00000605023 201 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC240442.1-201ENST00000616055 283 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC007546.2-201ENST00000623996 360 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AC021753.1-201ENST00000635724 168 ntBASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
SSBP3Q9BWW4 AL592437.2-201ENST00000421655 2434 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RNA5SP307-201ENST00000362863 116 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RNA5SP175-201ENST00000364275 119 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RNA5SP366-201ENST00000365454 123 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RNU6-937P-201ENST00000384325 106 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RPL23AP26-201ENST00000412728 464 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 AC017079.2-201ENST00000416102 485 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 EIF1P2-201ENST00000428233 350 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 RPL21P40-201ENST00000428586 483 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 AC069285.2-201ENST00000440210 275 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 AL590399.6-201ENST00000446396 307 ntBASIC3.62□□□□□ -1.83
SSBP3Q9BWW4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms