Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 Y_RNA.48-201ENST00000362710 103 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RNY1P16-201ENST00000363063 111 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 Y_RNA.112-201ENST00000363250 102 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RNA5SP479-201ENST00000364858 117 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 Y_RNA.326-201ENST00000365176 113 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RNU6-142P-201ENST00000384019 107 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 MIR544A-201ENST00000384855 91 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RNA5SP390-201ENST00000410191 113 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 NUP35P1-201ENST00000422734 947 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AL353997.1-201ENST00000432936 108 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC069285.2-201ENST00000440210 275 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC243964.1-201ENST00000441814 261 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 SNORD116.3-201ENST00000517176 78 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 CBX3P8-201ENST00000532412 525 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 MTND6P33-201ENST00000571794 183 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC006504.6-201ENST00000590142 199 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 AC096772.1-201ENST00000609146 564 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 MIR8059-201ENST00000620427 81 ntBASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAIPQ9BWF2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 U3.6-201ENST00000363622 211 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 RNU6-487P-201ENST00000365430 104 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 RNU6-700P-201ENST00000391043 107 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 SNORA57.1-201ENST00000391227 145 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 MIR1193-201ENST00000408109 78 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 SNORA11-201ENST00000408789 128 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC138623.1-201ENST00000418060 216 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AL035666.1-201ENST00000446195 348 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 RPS26P21-201ENST00000475397 348 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 PARP4P3-201ENST00000510265 317 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC008958.1-201ENST00000511047 682 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC091152.3-201ENST00000604227 325 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 ARF4P1-201ENST00000605447 541 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 CR392039.5-201ENST00000623201 510 ntBASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRAIPQ9BWF2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP513-201ENST00000364648 118 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP151-201ENST00000365632 117 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC117470.1-201ENST00000381974 330 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.463-201ENST00000384271 102 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RNU6-692P-201ENST00000384496 107 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RPL23AP52-201ENST00000439311 478 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AL353748.1-201ENST00000440753 474 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC022447.4-201ENST00000504053 364 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AL592156.1-201ENST00000508758 304 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.711-201ENST00000516993 102 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RNU6-699P-201ENST00000517081 110 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 SNORA31.23-201ENST00000517219 133 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 CKS1BP7-201ENST00000522230 235 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC100770.1-201ENST00000532310 322 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC007375.1-201ENST00000554513 578 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms