Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MTND2P20-201ENST00000440805 661 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 GXYLT1P1-201ENST00000446657 490 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 SEPT14P24-201ENST00000447236 180 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC245517.4-201ENST00000448601 281 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RN7SL429P-201ENST00000479090 223 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RN7SL489P-201ENST00000486185 223 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RN7SL327P-201ENST00000488659 223 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RPS15AP36-201ENST00000492022 382 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 MTND4P2-201ENST00000507767 1203 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNU6-678P-201ENST00000516832 109 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RNU6-667P-201ENST00000517186 102 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 COPS8P3-201ENST00000526024 482 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AL161670.1-201ENST00000554348 137 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC138915.2-201ENST00000569776 97 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC098826.3-201ENST00000603823 466 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC069304.2-201ENST00000605154 435 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC100814.1-201ENST00000606963 623 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AL512598.1-201ENST00000610158 273 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 RN7SL853P-201ENST00000617250 223 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC013470.4-201ENST00000619978 986 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC017037.3-201ENST00000625016 472 ntBASIC0.81□□□□□ -2.28
LIMD2Q9BT23 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
LIMD2Q9BT23 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 MIR758-201ENST00000390227 88 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 MIR1323-201ENST00000408090 73 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 MRPL35P3-201ENST00000421557 364 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 COX7BP2-201ENST00000437976 242 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 RPL23AP76-201ENST00000441860 458 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC010095.1-201ENST00000443543 144 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 RNA5SP57-201ENST00000459463 123 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC093801.2-201ENST00000503966 1050 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC116655.1-201ENST00000508324 901 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 ACA59.2-201ENST00000517061 156 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC005832.3-201ENST00000537929 631 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC135279.1-201ENST00000543493 504 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC023813.2-201ENST00000564321 469 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC091057.3-201ENST00000602684 733 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC087045.1-201ENST00000605856 382 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AL391813.2-201ENST00000609113 322 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC021755.4-201ENST00000616620 456 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 AC006338.1-201ENST00000618453 749 ntBASIC0.8□□□□□ -2.28
LIMD2Q9BT23 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LIMD2Q9BT23 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 HAUS6P2-201ENST00000433254 2404 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 Y_RNA.67-201ENST00000362870 100 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNU6-1164P-201ENST00000364428 107 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNU6-658P-201ENST00000384606 106 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MIR1262-201ENST00000408276 93 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MIR1289-2-201ENST00000408360 111 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNA5SP100-201ENST00000410903 110 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RNA5SP59-201ENST00000410922 110 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AL358453.1-201ENST00000422522 250 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 GPM6BP2-201ENST00000432046 144 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MTCYBP15-201ENST00000433123 1127 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 HMGB1P18-201ENST00000438801 619 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MTCO1P44-201ENST00000441935 243 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 BRK1P2-201ENST00000442875 223 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 MTCO3P45-201ENST00000443036 613 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 GPM6BP1-201ENST00000446387 144 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC017099.1-201ENST00000448261 1028 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 RPL7P55-201ENST00000450522 746 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AL590365.1-201ENST00000450788 243 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC009474.2-201ENST00000451383 136 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC092001.1-201ENST00000453012 261 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC112771.1-201ENST00000463581 102 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC021382.1-201ENST00000483523 359 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC011005.2-201ENST00000487324 359 ntBASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.79□□□□□ -2.28
LIMD2Q9BT23 AC108210.2-201ENST00000503681 201 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms