Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AP000916.1-201ENST00000533869 835 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 MIR4435-1-201ENST00000582552 80 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 RN7SL622P-201ENST00000585292 275 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC011451.2-201ENST00000604303 598 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AP001033.2-201ENST00000609701 1003 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AL596245.1-201ENST00000618994 362 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 AC002550.2-201ENST00000621246 394 ntBASIC0.73□□□□□ -2.29
VPS25Q9BRG1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNU4-82P-201ENST00000362443 140 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 U8.2-201ENST00000363156 134 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNA5SP387-201ENST00000364226 106 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNU4-91P-201ENST00000364778 135 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 SNORD51.1-201ENST00000365405 77 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNU6-968P-201ENST00000384076 107 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 MTCO2P31-201ENST00000402702 684 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AL139397.2-201ENST00000404529 772 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNU2-68P-201ENST00000410878 191 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 SRIP3-201ENST00000413200 219 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 ELOCP3-201ENST00000439303 348 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AL022238.1-201ENST00000442557 355 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 MTATP6P30-201ENST00000443540 664 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AC026410.2-201ENST00000460281 156 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AC118282.2-201ENST00000508739 374 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AC112198.4-201ENST00000515450 351 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AP003033.1-201ENST00000527244 415 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 AP000763.2-201ENST00000540641 163 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 DNAJC19P9-201ENST00000555084 351 ntBASIC0.72□□□□□ -2.29
VPS25Q9BRG1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS25Q9BRG1 RNU6-414P-201ENST00000363705 104 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 SNORD56.4-201ENST00000363883 71 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MIR217-201ENST00000384817 110 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 RN7SKP192-201ENST00000411291 327 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC069282.1-201ENST00000411911 526 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MTCO3P5-201ENST00000433620 714 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 PGBD4P5-201ENST00000445958 426 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MTCYBP11-201ENST00000447254 1109 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 OFD1P3Y-201ENST00000453312 783 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC091860.1-201ENST00000505723 432 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 RNU6-586P-201ENST00000517265 104 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AP003392.2-201ENST00000527269 208 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MRPS36P5-201ENST00000551909 298 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MIR4648-201ENST00000580107 72 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC211469.2-201ENST00000605461 205 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AL390208.1-201ENST00000605885 644 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AL132822.1-201ENST00000617063 513 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 AC132825.7-201ENST00000638744 335 ntBASIC0.71□□□□□ -2.3
VPS25Q9BRG1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
VPS25Q9BRG1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 ICE2P2-201ENST00000483823 2787 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 DBF4P1-201ENST00000412976 1892 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 RNU6-492P-201ENST00000363035 104 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 RNU4-13P-201ENST00000364019 141 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL590084.1-201ENST00000407885 387 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 CR848007.2-201ENST00000424918 787 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC008267.5-201ENST00000424928 265 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 RNU6-703P-201ENST00000516946 107 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 ACA59.2-201ENST00000517061 156 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC019176.1-201ENST00000518519 225 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL512310.1-201ENST00000548639 172 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC093249.1-201ENST00000567049 203 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC011494.1-201ENST00000596454 237 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 RPL30P11-203ENST00000598995 310 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 Z82243.1-201ENST00000609432 473 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 VN1R9P-201ENST00000614184 867 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AL590808.1-201ENST00000618696 141 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
VPS25Q9BRG1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS25Q9BRG1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms