Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN18Q99952 RNU6-99P-201ENST00000364721 107 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RNA5SP189-201ENST00000364920 115 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 Y_RNA.380-201ENST00000365663 111 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RNU6-946P-201ENST00000383878 107 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RNU6-434P-201ENST00000384376 107 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RNU6-393P-201ENST00000384475 107 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 MIR548I3-201ENST00000408378 149 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 MIR548I1-201ENST00000408810 149 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 AC017079.2-201ENST00000416102 485 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 DPH3P2-201ENST00000422618 250 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 AL669831.1-202ENST00000428504 417 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RPS24P13-201ENST00000442520 397 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RPL22P13-201ENST00000493291 347 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.12□□□□□ -1.75
PTPN18Q99952 CYCSP27-201ENST00000527643 293 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 AC026470.2-201ENST00000561492 181 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 RPL23AP84-201ENST00000571193 464 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.12□□□□□ -1.75
PTPN18Q99952 AC005357.1-201ENST00000588399 301 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 AL355297.3-201ENST00000604082 446 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.12□□□□□ -1.75
PTPN18Q99952 UBE3AP2-201ENST00000429033 2259 ntBASIC4.12□□□□□ -1.75
PTPN18Q99952 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN18Q99952 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PTPN18Q99952 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PTPN18Q99952 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPN18Q99952 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN18Q99952 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 SNORA80A-201ENST00000363922 136 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 SMIM11P1-201ENST00000369586 178 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 Y_RNA.489-201ENST00000384410 101 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 SNORA41-201ENST00000384675 132 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 Z99755.1-201ENST00000414048 380 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN18Q99952 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN18Q99952 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPN18Q99952 USMG5P1-201ENST00000425964 177 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 MTATP6P4-201ENST00000427725 675 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AL591704.1-201ENST00000432574 275 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPN18Q99952 RNU6-408P-201ENST00000515910 100 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 RNU2-69P-201ENST00000516061 100 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AC005899.2-201ENST00000584353 90 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 ATP1B3P1-201ENST00000605365 821 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AL021879.1-201ENST00000611756 288 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 AC006386.2-201ENST00000624491 75 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 AC012005.1-201ENST00000624575 75 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPN18Q99952 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPN18Q99952 AC009812.4-201ENST00000569134 1805 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPN18Q99952 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPN18Q99952 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPN18Q99952 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
PTPN18Q99952 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN18Q99952 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN18Q99952 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
PTPN18Q99952 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN18Q99952 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN18Q99952 SNORD62.1-201ENST00000362541 86 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 Y_RNA.307-201ENST00000365022 117 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 Y_RNA.389-201ENST00000383924 113 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-701P-201ENST00000384059 107 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-95P-201ENST00000384697 107 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 MIR607-201ENST00000385241 96 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-823P-201ENST00000391042 103 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPN18Q99952 AC093106.2-201ENST00000428212 385 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RPL26P6-201ENST00000440913 438 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 GAPDHP27-201ENST00000447427 1020 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN18Q99952 AP000873.1-201ENST00000463987 400 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN18Q99952 AL049874.1-201ENST00000489560 388 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 AC104564.1-201ENST00000493028 407 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 HMGB1P22-201ENST00000505315 124 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 AC005921.1-201ENST00000510589 286 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 AC107222.1-201ENST00000510899 637 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RN7SKP83-201ENST00000516512 178 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-307P-201ENST00000516743 106 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-388P-201ENST00000517012 105 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RNU6-389P-201ENST00000517048 105 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 RN7SKP40-201ENST00000517211 242 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN18Q99952 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN18Q99952 AP004242.1-201ENST00000533701 349 ntBASIC4.1□□□□□ -1.75
PTPN18Q99952 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms