Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 HMGB3P12-201ENST00000438745 556 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC016691.1-201ENST00000441321 413 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.19□□□□□ -2.06
NPAS2Q99743 AC010095.1-201ENST00000443543 144 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS2Q99743 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS2Q99743 MTCO1P42-201ENST00000457379 726 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 MTND1P3-201ENST00000484956 952 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS2Q99743 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS2Q99743 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC009902.1-201ENST00000519351 183 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AP002770.2-201ENST00000543613 532 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC008015.1-201ENST00000555505 465 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.19□□□□□ -2.06
NPAS2Q99743 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.19□□□□□ -2.06
NPAS2Q99743 AC009159.1-201ENST00000618386 642 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 AC091304.6-201ENST00000619761 202 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
NPAS2Q99743 AC120349.3-201ENST00000624377 529 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
NPAS2Q99743 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPAS2Q99743 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NPAS2Q99743 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
NPAS2Q99743 AL139276.1-201ENST00000311910 1001 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 Y_RNA.97-201ENST00000363094 102 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 U8.14-201ENST00000390843 143 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NPAS2Q99743 RPS20P2-201ENST00000402520 389 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS2Q99743 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.18□□□□□ -2.06
NPAS2Q99743 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS2Q99743 AC006366.1-201ENST00000422002 759 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
NPAS2Q99743 MTND5P25-201ENST00000430499 799 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AL591704.1-201ENST00000432574 275 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.18□□□□□ -2.06
NPAS2Q99743 AC124916.1-201ENST00000444020 547 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NPAS2Q99743 AC068587.2-201ENST00000478386 781 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.18□□□□□ -2.06
NPAS2Q99743 RPS3AP22-201ENST00000488297 769 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AF213884.2-201ENST00000510417 903 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 RNU6-581P-201ENST00000516214 105 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 RNU6-759P-201ENST00000516740 103 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 RNU6-678P-201ENST00000516832 109 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 ARL2BPP2-201ENST00000550907 489 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS2Q99743 MTND3P12-201ENST00000559068 328 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC002400.1-201ENST00000569310 726 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC174048.1-201ENST00000603389 144 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC018638.7-201ENST00000605836 1114 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC108747.1-201ENST00000609508 535 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.18□□□□□ -2.06
NPAS2Q99743 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 Z99571.1-201ENST00000636677 394 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.18□□□□□ -2.06
NPAS2Q99743 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
NPAS2Q99743 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPAS2Q99743 RNU6-288P-201ENST00000363690 104 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 SMIM11P1-201ENST00000369586 178 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 Y_RNA.534-201ENST00000384599 112 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 MIR1302-8-201ENST00000408342 128 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 RPL23AP39-201ENST00000415533 405 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AL353621.1-201ENST00000418219 243 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 EIF4EP4-201ENST00000424916 578 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AC018634.1-201ENST00000437554 401 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 GDI2P2-201ENST00000445131 608 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 ART2BP-201ENST00000453501 499 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC117503.1-201ENST00000472241 394 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC023194.1-201ENST00000493084 308 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 RNU6-572P-201ENST00000516724 80 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 RNU6-677P-201ENST00000516914 101 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 RNU6-1092P-201ENST00000516955 87 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 ACA59.2-201ENST00000517061 156 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC123904.2-201ENST00000548059 300 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 LINC00933-203ENST00000559812 219 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 MYL12BP1-201ENST00000569826 507 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
NPAS2Q99743 AL360219.1-201ENST00000610230 366 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC004223.4-201ENST00000612426 332 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AL589994.2-201ENST00000621124 579 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AC138627.2-201ENST00000624202 601 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 AL512643.1-201ENST00000635735 524 ntBASIC2.17□□□□□ -2.06
NPAS2Q99743 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms